RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CD53P19397 219 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 GABRA3P34903 492 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ODF4Q2M2E3 257 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 FAM214AQ32MH5 1076 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ZFP69Q49AA0 526 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 C11orf88Q6PI97 169 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 UNC5DQ6UXZ4 953 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SLC30A8Q8IWU4 369 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 OR51L1Q8NGJ5 315 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SLC38A5Q8WUX1 472 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 TRUB1Q8WWH5 349 aaKnown RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SECISBP2Q96T21 854 aaKnown RBP10.46□□□□□ -0.73
COL27A1-204ENST00000477421 SLC30A2Q9BRI3 323 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 ENPP5Q9UJA9 477 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 CYP8B1Q9UNU6 501 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 HEBP2Q9Y5Z4 205 aa10.46□□□□□ -0.73
COL27A1-204ENST00000477421 AHCTF1Q8WYP5 2266 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 TRBV4-1A0A0J9YWV2 114 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 ANTXRLA6NF34 631 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 H3BQ06 376 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-204ENST00000477421 PCDHGA12O60330 932 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 SLC25A12O75746 678 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 ARHGEF15O94989 841 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 GCGRP47871 477 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF385BQ569K4 471 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 RBM45Q8IUH3 476 aaKnown RBP10.46□□□□□ -0.74
COL27A1-204ENST00000477421 DRAXINQ8NBI3 349 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-204ENST00000477421 VN1R2Q8NFZ6 395 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 OR52P1PQ8NH57 321 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 UBTD2Q8WUN7 234 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 C16orf58Q96GQ5 468 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 SH3YL1Q96HL8 342 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-204ENST00000477421 CCDC115Q96NT0 180 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 TREX2Q9BQ50 279 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-204ENST00000477421 VNN3Q9NY84 501 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 CARD8Q9Y2G2 431 aa10.46□□□□□ -0.74
COL27A1-204ENST00000477421 RPP14O95059 124 aaKnown RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ADH1BP00325 375 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CXCL10P02778 98 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 FHP07954 510 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NTSR1P30989 418 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TGFBR1P36897 503 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 OR2B6P58173 313 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GABARAPL2P60520 117 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TUBA1BP68363 451 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PPP2R2BQ00005 443 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TRAM2Q15035 370 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 IRF4Q15306 451 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF791Q3KP31 576 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GGTA1PQ4G0N0 100 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TUBA1AQ71U36 451 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ADGRD2Q7Z7M1 963 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ASPGQ86U10 573 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NRMQ8IXM6 262 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF784Q8NCA9 323 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 OR13F1Q8NGS4 319 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 HHIPL1Q96JK4 782 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 MND1Q9BWT6 205 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PNO1Q9NRX1 252 aaKnown RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SACM1LQ9NTJ5 587 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ANKMY1Q9P2S6 941 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PAPPA2Q9BXP8 1791 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TRBV5-4A0A0C4DH59 114 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 LDB3O75112 727 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 REM1O75628 298 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 FURINP09958 794 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NDUFS1P28331 727 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SDC2P34741 201 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CLK3P49761 638 aaKnown RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ISL1P61371 349 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CYB561A3Q8NBI2 242 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 OR52E4Q8NGH9 312 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 UHRF1Q96T88 793 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CD180Q99467 661 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 LGR4Q9BXB1 951 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 RACGAP1Q9H0H5 632 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 MMP27Q9H306 513 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PRSS16Q9NQE7 514 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 NDUFAF4Q9P032 175 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 MAFFQ9ULX9 164 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PCDHGA2Q9Y5H1 932 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CSNK1G3Q9Y6M4 447 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SPAG17Q6Q759 2223 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ARID2Q68CP9 1835 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 LINC01553A4QN01 128 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 FAM183AA6NL82 134 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GFRA2O00451 464 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 FAAHO00519 579 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CHST10O43529 356 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GASTP01350 101 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 CAPNS1P04632 268 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PRR35P0CG20 571 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 PRKAR1AP10644 381 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 GGT2P36268 569 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SLC6A12P48065 614 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 SHC2P98077 582 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 TMEM215Q68D42 235 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 FCRLBQ6BAA4 426 aa10.45□□□□□ -0.74
COL27A1-204ENST00000477421 ABHD13Q7L211 337 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms