RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 BRCC3P46736 316 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 ZNF131P52739 623 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 SLC12A3P55017 1021 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 NLRP11P59045 1033 aaKnown RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 CCZ1BP86790 482 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 CCZ1P86791 482 aaPredicted RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 CBX3Q13185 183 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 TSTA3Q13630 321 aaPredicted RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 HIST2H2AA3Q6FI13 130 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 ETFRF1Q6IPR1 90 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 RHBDD2Q6NTF9 364 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 FAM43BQ6ZT52 329 aaPredicted RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 ASRGL1Q7L266 308 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 BNIPLQ7Z465 357 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 GPR142Q7Z601 462 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 BEST4Q8NFU0 473 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 NEK11Q8NG66 645 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 AGAP11Q8TF27 550 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 EEF2KMTQ96G04 330 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 TEX13AQ9BXU3 409 aaPredicted RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 CLEC5AQ9NY25 188 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 TUBGCP4Q9UGJ1 667 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 TRMT6Q9UJA5 497 aaKnown RBP3.28□□□□□ -1.88
RBM39-231ENST00000477334 APPL1Q9UKG1 709 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 IKZF3Q9UKT9 509 aa3.28□□□□□ -1.88
RBM39-231ENST00000477334 DHX29Q7Z478 1369 aaKnown RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ZNF487B1APH4 448 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ZNF253O75346 499 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 KBTBD11O94819 623 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 OAS1P00973 400 aaKnown RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 PDGFBP01127 241 aaPredicted RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 UCP1P25874 307 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 MARCKSP29966 332 aaPredicted RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 NT5C2P49902 561 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 CSRP3P50461 194 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 HNRNPFP52597 415 aaKnown RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 NDST1P52848 882 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 SRP54P61011 504 aaKnown RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 TRA2BP62995 288 aaKnown RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 PEX6Q13608 980 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 CLPPQ16740 277 aaPredicted RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 C17orf58Q2M2W7 97 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 HKDC1Q2TB90 917 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 CNPY1Q3B7I2 92 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 SLC22A6Q4U2R8 563 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 C14orf28Q4W4Y0 310 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 FAM219BQ5XKK7 198 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 DLEU7Q6UYE1 221 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 LUZP1Q86V48 1076 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 OR8H1Q8NGG4 311 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 FLVCR1-AS1Q8TAF5 88 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ZNF671Q8TAW3 534 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 BIRC7Q96CA5 298 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 MCCC1Q96RQ3 725 aaPredicted RBP3.27□□□□□ -1.89
RBM39-231ENST00000477334 ST6GALNAC5Q9BVH7 336 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 SLC7A10Q9NS82 523 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ABCC13Q9NSE7 274 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 CUTCQ9NTM9 273 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 FETUBQ9UGM5 382 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 FAM153AQ9UHL3 310 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 MOSPD1Q9UJG1 213 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 RNF24Q9Y225 148 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ENTPD4Q9Y227 616 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ATG4BQ9Y4P1 393 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 ABCC9O60706 1549 aa3.27□□□□□ -1.89
RBM39-231ENST00000477334 GPRASP1Q5JY77 1395 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 NPC1L1Q9UHC9 1359 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 E2F3O00716 465 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HTATSF1O43719 755 aaKnown RBP3.26□□□□□ -1.89
RBM39-231ENST00000477334 NME2P1O60361 137 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 SRPX2O60687 465 aaPredicted RBP3.26□□□□□ -1.89
RBM39-231ENST00000477334 LRP3O75074 770 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 SYNGR4O95473 234 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 PIGRP01833 764 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HIST1H2AGP0C0S8 130 aaPredicted RBP3.26□□□□□ -1.89
RBM39-231ENST00000477334 SLC7A2P52569 658 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 IST1P53990 364 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HMGCS2P54868 508 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 CARTPTQ16568 116 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HAGHQ16775 308 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 TTC31Q49AM3 519 aaPredicted RBP3.26□□□□□ -1.89
RBM39-231ENST00000477334 ACER2Q5QJU3 275 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 APOOLQ6UXV4 268 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 MOB2Q70IA6 237 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 ADAMTSL2Q86TH1 951 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 SLC22A16Q86VW1 577 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 MARCH9Q86YJ5 346 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.26□□□□□ -1.89
RBM39-231ENST00000477334 SPAG16Q8N0X2 631 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 SLC22A18ASQ8N1D0 253 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 LEMD2Q8NC56 503 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 TMEM185AQ8NFB2 350 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 EXOC6Q8TAG9 804 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 RSPH1Q8WYR4 309 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 P3H4Q92791 437 aa3.26□□□□□ -1.89
RBM39-231ENST00000477334 HIST1H2ACQ93077 130 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms