RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RIT1Q92963 219 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 TP53INP1Q96A56 240 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 MAGOHBQ96A72 148 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 ESAMQ96AP7 390 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 KRT12Q99456 494 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 MED18Q9BUE0 208 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 SORBS1Q9BX66 1292 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 PPANQ9NQ55 473 aaKnown RBP10.33□□□□□ -0.76
BRCA1-213ENST00000476777 SNX15Q9NRS6 342 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 MS4A12Q9NXJ0 267 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 WWOXQ9NZC7 414 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 CTNNAL1Q9UBT7 734 aa10.33□□□□□ -0.76
BRCA1-213ENST00000476777 A0A1W2PNV4 684 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 SAP18O00422 153 aaKnown RBP10.32□□□□□ -0.76
BRCA1-213ENST00000476777 MSTNO14793 375 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 OR10H2O60403 315 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 TGFB1P01137 390 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 EPORP19235 508 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 SSTR4P31391 388 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 CCKARP32238 428 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 SSR2P43308 183 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 TAS2R39P59534 338 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 EEF1A1P68104 462 aaKnown RBP10.32□□□□□ -0.76
BRCA1-213ENST00000476777 TNFRSF17Q02223 184 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 PCDH1Q08174 1060 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 SETDB1Q15047 1291 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 PDK4Q16654 411 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 PAGE2BQ5JRK9 111 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 EEF1A1P5Q5VTE0 462 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 OR4C11Q6IEV9 310 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF474Q6S9Z5 364 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-213ENST00000476777 GPR180Q86V85 440 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 MEIOBQ8N635 442 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 SNX31Q8N9S9 440 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 OR1J4Q8NGS1 313 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 ADIPOR1Q96A54 375 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 CTHRC1Q96CG8 243 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 PELOQ9BRX2 385 aaKnown RBP10.32□□□□□ -0.76
BRCA1-213ENST00000476777 NAT9Q9BTE0 207 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF701Q9NV72 531 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-213ENST00000476777 PSAT1Q9Y617 370 aa10.32□□□□□ -0.76
BRCA1-213ENST00000476777 CR1P17927 2039 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CDH16O75309 829 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 STK16O75716 305 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 SOX30O94993 753 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 GPR75O95800 540 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TGM6O95932 706 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 ABCB1P08183 1280 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CHMP24386 653 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TLX1P31314 330 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 GALNSP34059 522 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 GCKP35557 465 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 UGT2B10P36537 528 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CD79BP40259 229 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 HSPA7P48741 367 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TMED10P49755 219 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 HNRNPH2P55795 449 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 RPP38P78345 283 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 IRF8Q02556 426 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 DMTNQ08495 405 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 FUT7Q11130 342 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CHIT1Q13231 466 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TNK1Q13470 666 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 LAPTM5Q13571 262 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 E2F2Q14209 437 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TBCCQ15814 346 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 HIST2H2ACQ16777 129 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 KHDRBS2Q5VWX1 349 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 HIST2H2AA3Q6FI13 130 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 PODNL1Q6PEZ8 512 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CCDC137Q6PK04 289 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 ENPP6Q6UWR7 440 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 ANGPTL8Q6UXH0 198 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 C22orf34Q6ZV56 151 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 PLEKHM3Q6ZWE6 761 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 ZC3HC1Q86WB0 502 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TRIM42Q8IWZ5 723 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 PRR22Q8IZ63 422 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TCAIMQ8N3R3 496 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 TMEM158Q8WZ71 300 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 UCN3Q969E3 161 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 STARD4Q96DR4 205 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 FAM111AQ96PZ2 611 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 OR2B2Q9GZK3 357 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 OR51B5Q9H339 312 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 CNOT10Q9H9A5 744 aaKnown RBP10.31□□□□□ -0.76
BRCA1-213ENST00000476777 PHF11Q9UIL8 331 aa10.31□□□□□ -0.76
BRCA1-213ENST00000476777 FAM95CA0A1B0GW59 222 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 GLOD5A6NK44 160 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 PLOD2O00469 737 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SMNDC1O75940 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
BRCA1-213ENST00000476777 IFNA2P01563 188 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SLC35E2BP0CK96 405 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SLC35E2P0CK97 266 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 ABCD3P28288 659 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 PTGDSP41222 190 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 STARP49675 285 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 LHX2P50458 406 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 NR1H2P55055 460 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms