RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PENKP01210 267 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 H1F0P07305 194 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 DCNP07585 359 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PTHLHP12272 177 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 AMD1P17707 334 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 BMP7P18075 431 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ITPKBP27987 946 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SOX18P35713 384 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SPINT3P49223 89 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 UBXN2BQ14CS0 331 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SPHARQ15513 63 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 C6orf132Q5T0Z8 1188 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PIP5KL1Q5T9C9 394 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 BCL2L15Q5TBC7 163 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 LAIR1Q6GTX8 287 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 Q6ZNX1 250 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TTLL10Q6ZVT0 673 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PACRGLQ8N7B6 248 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 RASGEF1AQ8N9B8 481 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GLB1L3Q8NCI6 653 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FAM46DQ8NEK8 389 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF480Q8WV37 535 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TRUB1Q8WWH5 349 aaKnown RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLC38A4Q969I6 547 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLC35B4Q969S0 331 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GAL3ST4Q96RP7 486 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GAS2L1Q99501 681 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-204ENST00000476379 NEURL2Q9BR09 285 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 DOHHQ9BU89 302 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 GSDMCQ9BYG8 508 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PLA2G2FQ9BZM2 168 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 FOXQ1Q9C009 403 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 SLC7A5P2Q9GIP4 190 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF385DQ9H6B1 395 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 TM9SF3Q9HD45 589 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 PRDM9Q9NQV7 894 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 C2orf42Q9NWW7 574 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 CDH7Q9ULB5 785 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 OR10H1Q9Y4A9 318 aa4.74□□□□□ -1.65
CCDC39-204ENST00000476379 COL6A6A6NMZ7 2263 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 AREL1O15033 823 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 HOXA2O43364 376 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 OR10H2O60403 315 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 HPGDSO60760 199 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 B4GALT2O60909 372 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SLC2A10O95528 541 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 CYP17A1P05093 508 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 CD3GP09693 182 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ADORA3P0DMS8 318 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MAOBP27338 520 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 DCKP27707 260 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 TNFSF8P32971 234 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 PSMB10P40306 273 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ACTR1BP42025 376 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MAGEB1P43366 347 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 CDH11P55287 796 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ACTR1AP61163 376 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ADARB1P78563 741 aaKnown RBP4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MANEALQ5VSG8 457 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF691Q5VV52 312 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MLIPQ5VWP3 458 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 BHLHB9Q6PI77 547 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 VITQ6UXI7 678 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 USP43Q70EL4 1123 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 C6orf120Q7Z4R8 191 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SPRED1Q7Z699 444 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 NLRP8Q86W28 1048 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 FOXRED2Q8IWF2 684 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 HORMAD2Q8N7B1 307 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MFSD2AQ8NA29 543 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 LEMD2Q8NC56 503 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 OR8J3Q8NGG0 315 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 DNAJB8Q8NHS0 232 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SLC35G5Q96KT7 338 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 MYADMQ96S97 322 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 TEX12Q9BXU0 123 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SLC2A11Q9BYW1 496 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 RNF32Q9H0A6 362 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 OR51I1Q9H343 314 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 TDP1Q9NUW8 608 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 KLHL28Q9NXS3 571 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 GSTK1Q9Y2Q3 226 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 TP53BP1Q12888 1972 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-204ENST00000476379 EPG5Q9HCE0 2579 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 C12orf71A8MTZ7 269 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ARHGAP33O14559 1287 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 KDM4BO94953 1096 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 EPOP01588 193 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 C6P13671 934 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 GNSP15586 552 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ENDOUP21128 410 aaKnown RBP4.73□□□□□ -1.65
CCDC39-204ENST00000476379 VIPR1P32241 457 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 PYCR1P32322 319 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ACSL1P33121 698 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SRP9P49458 86 aaKnown RBP4.73□□□□□ -1.65
CCDC39-204ENST00000476379 CTBP2P56545 445 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF763Q0D2J5 394 aa4.73□□□□□ -1.65
CCDC39-204ENST00000476379 SFSWAPQ12872 951 aaKnown RBP4.73□□□□□ -1.65
CCDC39-204ENST00000476379 FGL2Q14314 439 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms