RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 DTX1Q86Y01 620 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 TMEM151BQ8IW70 566 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PGAM4Q8N0Y7 254 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CLEC4FQ8N1N0 589 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 RBM15BQ8NDT2 890 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 GOT1L1Q8NHS2 421 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 PNPT1Q8TCS8 783 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 DOK4Q8TEW6 326 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 KCNE4Q8WWG9 221 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 JADE3Q92613 823 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 DAZLQ92904 295 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 C8orf44Q96CB5 159 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 LRRC58Q96CX6 371 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 ELP4Q96EB1 424 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 FAM120BQ96EK7 910 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 VPS50Q96JG6 964 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CGREF1Q99674 301 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 LPAR4Q99677 370 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 EFHD1Q9BUP0 239 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 OR8D2Q9GZM6 311 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CXorf36Q9H7Y0 433 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CXorf21Q9HAI6 301 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 EQTNQ9NQ60 294 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SLC6A13Q9NSD5 602 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SIRT3Q9NTG7 399 aaPredicted RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 VAPAQ9P0L0 249 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 SLAMF8Q9P0V8 285 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PTGFRNQ9P2B2 879 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 COPS7AQ9UBW8 275 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 BCAP29Q9UHQ4 241 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CORO2BQ9UQ03 480 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 ERVK-19Q9WJR5 959 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 L3MBTL1Q9Y468 752 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 CLDN16Q9Y5I7 305 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 MRPS18BQ9Y676 258 aaKnown RBP7.79□□□□□ -1.16
CNN3-205ENST00000474409 PCNX3Q9H6A9 2034 aa7.79□□□□□ -1.16
CNN3-205ENST00000474409 EVPLLA8MZ36 301 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 FXYD1O00168 92 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 GYG2O15488 501 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 PRAMEF2O60811 474 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 BCAS2O75934 225 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 KRT75O95678 551 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 IFI6P09912 130 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 ZCCHC18P0CG32 403 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 LIFP15018 202 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 F8A1P23610 371 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 MMP11P24347 488 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 HOXD11P31277 338 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 CCT3P49368 545 aaKnown RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 KHKP50053 298 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 PSME3P61289 254 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 NCALDP61601 193 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 IL10RAQ13651 578 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SSPNQ14714 243 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 TMEM205Q6UW68 189 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 DLEU7Q6UYE1 221 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 DGAT2L6Q6ZPD8 337 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 RINLQ6ZS11 566 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 DEFB107AQ8IZN7 70 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 NUP43Q8NFH3 380 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 OR7G2Q8NG99 324 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 OR52R1Q8NGF1 315 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 OR8J3Q8NGG0 315 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 PSMA8Q8TAA3 256 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SLC2A12Q8TD20 617 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 ZFP90Q8TF47 636 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 MCUR1Q96AQ8 359 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 AURKBQ96GD4 344 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 NAF1Q96HR8 494 aaKnown RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SH3GL1Q99961 368 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 CPPED1Q9BRF8 314 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 TMEM121BQ9BXQ6 578 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 TRIM8Q9BZR9 551 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 RAD21L1Q9H4I0 556 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 ANKRA2Q9H9E1 313 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 TPT1P8Q9HAU6 139 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SPAG4Q9NPE6 437 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SLC25A37Q9NYZ2 338 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 ADA2Q9NZK5 511 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 IL17BQ9UHF5 180 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 FAF1Q9UNN5 650 aaPredicted RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 WASF3Q9UPY6 502 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 PCDHGA6Q9Y5G7 932 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 HS3ST3B1Q9Y662 390 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.78□□□□□ -1.16
CNN3-205ENST00000474409 NCKAP5O14513 1909 aa7.78□□□□□ -1.16
CNN3-205ENST00000474409 A0A087WV62 115 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 TRBV5-3A0A0A0MS03 114 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 IGHV1-45A0A0A0MS14 117 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 NSG1A0A0A6YYJ2 146 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CDC14CA4D256 554 aa7.77□□□□□ -1.17
CNN3-205ENST00000474409 CLIC1O00299 241 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms