RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 NTMT1Q9BV86 223 aa22.71■■□□□ 1.23
PKD1-211ENST00000474088 POLDIP3Q9BY77 421 aaKnown RBP22.71■■□□□ 1.23
PKD1-211ENST00000474088 UBQLN3Q9H347 655 aa22.71■■□□□ 1.23
PKD1-211ENST00000474088 AHSPQ9NZD4 102 aa22.71■■□□□ 1.23
PKD1-211ENST00000474088 ADAM29Q9UKF5 820 aa22.71■■□□□ 1.23
PKD1-211ENST00000474088 KDM4EB2RXH2 506 aaPredicted RBP22.7■■□□□ 1.22
PKD1-211ENST00000474088 DVL2O14641 736 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 HPNP05981 417 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 BMP5P22003 454 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 TIMP3P35625 211 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 CASP3P42574 277 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 CDK9P50750 372 aaKnown RBP22.7■■□□□ 1.22
PKD1-211ENST00000474088 CCNG1P51959 295 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 ACSF3Q4G176 576 aaPredicted RBP22.7■■□□□ 1.22
PKD1-211ENST00000474088 FRG2Q64ET8 278 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 ZNF572Q7Z3I7 529 aaPredicted RBP22.7■■□□□ 1.22
PKD1-211ENST00000474088 OR7G1Q8NGA0 311 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 PHF21BQ96EK2 531 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 GNRHR2Q96P88 292 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 FRG2BQ96QU4 278 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 ZDHHC18Q9NUE0 388 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 ZNF358Q9NW07 568 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 ARHGAP21Q5T5U3 1957 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 NINQ8N4C6 2090 aa22.7■■□□□ 1.22
PKD1-211ENST00000474088 FAM221AA4D161 298 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 RBP1P09455 135 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 NT5EP21589 574 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 PHBP35232 272 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 MASP1P48740 699 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 WNT3P56703 355 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 ETF1P62495 437 aaKnown RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 RPP38P78345 283 aaKnown RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 CCNYL2Q5T2Q4 361 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 TTC19Q6DKK2 380 aaPredicted RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 VASNQ6EMK4 673 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 SYT10Q6XYQ8 523 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 LACC1Q8IV20 430 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 PM20D2Q8IYS1 436 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 C17orf47Q8NEP4 570 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 NINJ1Q92982 152 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 SH3GL2Q99962 352 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 GPATCH1Q9BRR8 931 aaKnown RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 MRPL1Q9BYD6 325 aaKnown RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 PRDM14Q9GZV8 571 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 ACSS3Q9H6R3 686 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 ZBTB26Q9HCK0 441 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 RASSF1Q9NS23 344 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 CRIM1Q9NZV1 1036 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 ZNF629Q9UEG4 869 aaPredicted RBP22.69■■□□□ 1.22
PKD1-211ENST00000474088 PCTPQ9UKL6 214 aa22.69■■□□□ 1.22
PKD1-211ENST00000474088 STX16-NPEPL1H3BU86 382 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 STX16O14662 325 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 IL2RAP01589 272 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 CPMP14384 443 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 PORP16435 677 aaPredicted RBP22.68■■□□□ 1.22
PKD1-211ENST00000474088 S1PR1P21453 382 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 ASCL1P50553 236 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 SF3B4Q15427 424 aaKnown RBP eCLIP22.68■■□□□ 1.22
PKD1-211ENST00000474088 C10orf62Q5T681 223 aaPredicted RBP22.68■■□□□ 1.22
PKD1-211ENST00000474088 C6orf163Q5TEZ5 329 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 POMZP3Q6PJE2 187 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 PAGE2Q7Z2X7 111 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 PRR22Q8IZ63 422 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 METTL4Q8N3J2 472 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 NTNG2Q96CW9 530 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 LRRC46Q96FV0 321 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 TMEM41AQ96HV5 264 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 NSUN5Q96P11 429 aaKnown RBP22.68■■□□□ 1.22
PKD1-211ENST00000474088 FOXC2Q99958 501 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 CXXC4Q9H2H0 198 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 LIME1Q9H400 295 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 CCM2LQ9NUG4 571 aaPredicted RBP22.68■■□□□ 1.22
PKD1-211ENST00000474088 TMCO1Q9UM00 188 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 C15orf41Q9Y2V0 281 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 SLC6A5Q9Y345 797 aa22.68■■□□□ 1.22
PKD1-211ENST00000474088 GPX3P22352 226 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 ABCD3P28288 659 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 TRAF3Q13114 568 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 FBXL19-AS1Q494R0 122 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 NHSL2Q5HYW2 709 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 UBAP2Q5T6F2 1119 aaKnown RBP22.67■■□□□ 1.22
PKD1-211ENST00000474088 TRPC4APQ8TEL6 797 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 RNASE6Q93091 150 aaKnown RBP22.67■■□□□ 1.22
PKD1-211ENST00000474088 LRRC1Q9BTT6 524 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 CLEC4MQ9H2X3 399 aaPredicted RBP22.67■■□□□ 1.22
PKD1-211ENST00000474088 NINJ2Q9NZG7 142 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 ST6GALNAC2Q9UJ37 374 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 CES1P1Q9UKY3 287 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 PCDHA9Q9Y5H5 950 aa22.67■■□□□ 1.22
PKD1-211ENST00000474088 ABCB1P08183 1280 aaPredicted RBP22.66■■□□□ 1.22
PKD1-211ENST00000474088 NAGAP17050 411 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 BMP7P18075 431 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 KRT15P19012 456 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 MAGEA12P43365 314 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 MAPK12P53778 367 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 IFT88Q13099 833 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 TOMM20Q15388 145 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 NSUN5P2Q63ZY6 315 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 MILR1Q7Z6M3 343 aa22.66■■□□□ 1.22
PKD1-211ENST00000474088 FAM222BQ8WU58 562 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms