RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC12A4Q9UP95 1085 aa20.71■□□□□ 0.91
C9orf3-213ENST00000471978 HCFC1P51610 2035 aa20.71■□□□□ 0.91
C9orf3-213ENST00000471978 A0A0G2JNJ9 132 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 ANKRD33BA6NCL7 494 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 PPP6CO00743 305 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 PDYNP01213 254 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 HOXD4P09016 255 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-213ENST00000471978 SBK3P0C264 359 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 CPMP14384 443 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 TSPAN8P19075 237 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 NT5EP21589 574 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 CDH13P55290 713 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 FBXW4P57775 412 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 RPS6KA2Q15349 733 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
C9orf3-213ENST00000471978 TBCELQ5QJ74 424 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 TMEM198Q66K66 360 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 LETMD1Q6P1Q0 360 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 COMMD6Q7Z4G1 85 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 DMRTC2Q8IXT2 367 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-213ENST00000471978 LIX1Q8N485 282 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 TRPC4APQ8TEL6 797 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 ZNF597Q96LX8 424 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 SLC6A15Q9H2J7 730 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 Q9UFV3 132 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 NPFFR2Q9Y5X5 522 aa20.7■□□□□ 0.9
C9orf3-213ENST00000471978 INTS1Q8N201 2190 aaKnown RBP20.7■□□□□ 0.9
C9orf3-213ENST00000471978 A8MT66 165 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 GUCY1B2O75343 617 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 TRIM3O75382 744 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-213ENST00000471978 SNRPAP09012 282 aaKnown RBP20.69■□□□□ 0.9
C9orf3-213ENST00000471978 CTAGE8P0CG41 777 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 GABRA1P14867 456 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 PORP16435 677 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-213ENST00000471978 GDF1P27539 372 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 ADH7P40394 386 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 TRPC1P48995 793 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 NRG3P56975 720 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 CTAGE4Q8IX94 777 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 TMEM151AQ8N4L1 468 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 MYRIPQ8NFW9 859 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 OR7G1Q8NGA0 311 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 NEIL3Q8TAT5 605 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 SELENOMQ8WWX9 145 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 ADIPOR1Q96A54 375 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 C1QTNF3Q9BXJ4 246 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 SNX6Q9UNH7 406 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 PCDHA9Q9Y5H5 950 aa20.69■□□□□ 0.9
C9orf3-213ENST00000471978 HIVEP1P15822 2718 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 C1orf226A1L170 272 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 DEKP35659 375 aaKnown RBP20.68■□□□□ 0.9
C9orf3-213ENST00000471978 TMED10P49755 219 aaKnown RBP20.68■□□□□ 0.9
C9orf3-213ENST00000471978 GALNT1Q10472 559 aaPredicted RBP20.68■□□□□ 0.9
C9orf3-213ENST00000471978 TEX35Q5T0J7 233 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 BICRALQ6AI39 1079 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 SLC48A1Q6P1K1 146 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 CDH24Q86UP0 819 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 SPPL2AQ8TCT8 520 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 BRF2Q9HAW0 419 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 CES1P1Q9UKY3 287 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 NCKAP5O14513 1909 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 NINQ8N4C6 2090 aa20.68■□□□□ 0.9
C9orf3-213ENST00000471978 EXOC1LA0A1B0GW35 172 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 GOLGA6L10A6NI86 522 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 FAM47E-STBD1D6RA91 191 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 S1PR1P21453 382 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 LGSNQ5TDP6 509 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 LIX1LQ8IVB5 337 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 PRR22Q8IZ63 422 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 CLYBLQ8N0X4 340 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 MMP21Q8N119 569 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 VWA5B2Q8N398 1253 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 C17orf47Q8NEP4 570 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 TM4SF18Q96CE8 201 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 RILPQ96NA2 401 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 SECISBP2Q96T21 854 aaKnown RBP20.67■□□□□ 0.9
C9orf3-213ENST00000471978 BRINP2Q9C0B6 783 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 NMRK1Q9NWW6 199 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 TRPS1Q9UHF7 1281 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 PCDHGB3Q9Y5G1 929 aa20.67■□□□□ 0.9
C9orf3-213ENST00000471978 F8P00451 2351 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 C15orf38-AP3S2A0A0A6YYH1 394 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 ERAL1O75616 437 aaKnown RBP20.66■□□□□ 0.9
C9orf3-213ENST00000471978 TRAPPC6AO75865 159 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 OR4F21O95013 312 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 SNX4O95219 450 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 GPX3P22352 226 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 HSD17B3P37058 310 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 FEN1P39748 380 aaKnown RBP20.66■□□□□ 0.9
C9orf3-213ENST00000471978 MASP1P48740 699 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 RPP38P78345 283 aaKnown RBP20.66■□□□□ 0.9
C9orf3-213ENST00000471978 CLCQ05315 142 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 DUSP8Q13202 625 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 FAM219BQ5XKK7 198 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 PACS2Q86VP3 889 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 ULK2Q8IYT8 1036 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 HBEGFQ99075 208 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 ZNF559Q9BR84 538 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 ANGPTL4Q9BY76 406 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 KCNN3Q9UGI6 736 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms