RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RCN2Q14257 317 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 NTRK2Q16620 822 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 NDUFAF5Q5TEU4 345 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 FRG2Q64ET8 278 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 C8orf74Q6P047 294 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CYP20A1Q6UW02 462 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 B3GNT6Q6ZMB0 384 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 RNF111Q6ZNA4 994 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 COMMD6Q7Z4G1 85 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 MILR1Q7Z6M3 343 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 GPALPP1Q8IXQ4 340 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 ULK2Q8IYT8 1036 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 LRRC25Q8N386 305 aaPredicted RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 METTL4Q8N3J2 472 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 FBXW8Q8N3Y1 598 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 MMGT1Q8N4V1 131 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 GOLM1Q8NBJ4 401 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 ANKK1Q8NFD2 765 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 ZNF483Q8TF39 744 aaPredicted RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 ZNF592Q92610 1267 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 ATP6V1E2Q96A05 226 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 FRG2BQ96QU4 278 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 KCNA7Q96RP8 456 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 NODALQ96S42 347 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 TIMP4Q99727 224 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 OR10A5Q9H207 317 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 EPB41L4BQ9H329 900 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 LDAHQ9H6V9 325 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 GALNT9Q9HCQ5 603 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 KCNJ16Q9NPI9 418 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 TMEM216Q9P0N5 145 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 COPS7AQ9UBW8 275 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 PHF11Q9UIL8 331 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 NPFFR2Q9Y5X5 522 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 MED13LQ71F56 2210 aa7.4□□□□□ -1.23
USP48-207ENST00000471752 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 HCFC1P51610 2035 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 TRGV5A0A0B4J1U4 118 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SYCE1LA8MT33 242 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 GOLGA8RI6L899 631 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 MANBAO00462 879 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 GNB5O14775 395 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SUSD5O60279 629 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ERAL1O75616 437 aaKnown RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 TRAPPC6AO75865 159 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ABCB1P08183 1280 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 RPS17P08708 135 aaKnown RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 PCSK2P16519 638 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 GPX3P22352 226 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 CNTFP26441 200 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 TLX1P31314 330 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 HSD17B3P37058 310 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ARL1P40616 181 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 CASP3P42574 277 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 STARP49675 285 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 NAGLUP54802 743 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 FOXA1P55317 472 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 PLIN5Q00G26 463 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SPRED3Q2MJR0 410 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 PRICKLE4Q2TBC4 344 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 WIPI1Q5MNZ9 446 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 TEX35Q5T0J7 233 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 CCNYL2Q5T2Q4 361 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 C1orf185Q5T7R7 199 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 TMEM211Q6ICI0 200 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 GK5Q6ZS86 529 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 CDH24Q86UP0 819 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 LSRQ86X29 649 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 ZZZ3Q8IYH5 903 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 C1orf52Q8N6N3 182 aaKnown RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 RELL2Q8NC24 303 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 OR4N2Q8NGD1 307 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 OR4K14Q8NGD5 310 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 NEIL3Q8TAT5 605 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SPPL2AQ8TCT8 520 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ASB5Q8WWX0 329 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 DIO2Q92813 273 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 KAT2AQ92830 837 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 HGDQ93099 445 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 C14orf79Q96F83 325 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 CNRIP1Q96F85 164 aaPredicted RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 ZNF681Q96N22 645 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 RILPQ96NA2 401 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SERPINI1Q99574 410 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 NTMT1Q9BV86 223 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ITPAQ9BY32 194 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ANGPTL4Q9BY76 406 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 UBQLN3Q9H347 655 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 EXO5Q9H790 373 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 LYARQ9NX58 379 aaKnown RBP7.39□□□□□ -1.23
USP48-207ENST00000471752 MS4A12Q9NXJ0 267 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 PSD3Q9NYI0 1048 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 COQ3Q9NZJ6 369 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 MAT2BQ9NZL9 334 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 ZNF639Q9UID6 485 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 NFU1Q9UMS0 254 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 SLC12A4Q9UP95 1085 aa7.39□□□□□ -1.23
USP48-207ENST00000471752 L3MBTL1Q9Y468 752 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms