RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CPT1CQ8TCG5 803 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 TP53INP1Q96A56 240 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 SCMH1Q96GD3 660 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 C5orf34Q96MH7 638 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 SIGLEC12Q96PQ1 595 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 RASL10BQ96S79 203 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 BRINP2Q9C0B6 783 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 OR10A5Q9H207 317 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 MEAF6Q9HAF1 191 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 ANKRD10Q9NXR5 420 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 ASIC5Q9NY37 505 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 GIMAP2Q9UG22 337 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 EIF3LQ9Y262 564 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 COPG1Q9Y678 874 aaKnown RBP14.17□□□□□ -0.14
SDC3-203ENST00000471567 CROCCQ5TZA2 2017 aa14.17□□□□□ -0.14
SDC3-203ENST00000471567 HDAC3O15379 428 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 NTSP30990 170 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 PDE7AQ13946 482 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 PRSS53Q2L4Q9 553 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 ZNF628Q5EBL2 1059 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 SLC25A25Q6KCM7 469 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 OPN5Q6U736 354 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 C16orf47Q6ZP98 133 aaPredicted RBP14.16□□□□□ -0.14
SDC3-203ENST00000471567 LIX1Q8N485 282 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 CISD2Q8N5K1 135 aaKnown RBP14.16□□□□□ -0.14
SDC3-203ENST00000471567 TMEM178AQ8NBL3 297 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 C17orf47Q8NEP4 570 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 ADCY4Q8NFM4 1077 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 SLC22A8Q8TCC7 542 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 ASB15Q8WXK1 588 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 TMEM125Q96AQ2 219 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 PPCDCQ96CD2 204 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 SNRNP40Q96DI7 357 aaKnown RBP14.16□□□□□ -0.14
SDC3-203ENST00000471567 NUF2Q9BZD4 464 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 WWTR1Q9GZV5 400 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 AKTIPQ9H8T0 292 aa14.16□□□□□ -0.14
SDC3-203ENST00000471567 LIN28AQ9H9Z2 209 aaKnown RBP14.16□□□□□ -0.14
SDC3-203ENST00000471567 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
SDC3-203ENST00000471567 C2orf92A0A1B0GVN3 265 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 TRPC5OSA6NMA1 111 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 A8MVJ9 347 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 J3QKU1 62 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 AKAP10O43572 662 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 PLOD3O60568 738 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 SLC25A12O75746 678 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 SP1P08047 785 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 IFI6P09912 130 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 PCSK2P16519 638 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 SOX18P35713 384 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 HPCAL1P37235 193 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 NCBP2P52298 156 aaKnown RBP eCLIP14.15□□□□□ -0.14
SDC3-203ENST00000471567 FOXK1P85037 733 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 LTB4RQ15722 352 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 TRMT12Q53H54 448 aaKnown RBP14.15□□□□□ -0.14
SDC3-203ENST00000471567 HLA-DQA1Q5Y7H0 255 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 ZNF227Q86WZ6 799 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 DND1Q8IYX4 353 aaKnown RBP14.15□□□□□ -0.14
SDC3-203ENST00000471567 CYP4Z2PQ8N1L4 340 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 ZNF441Q8N8Z8 693 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 OR9A2Q8NGT5 310 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 CLHC1Q8NHS4 586 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 LRRC8CQ8TDW0 803 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 GFM2Q969S9 779 aaKnown RBP14.15□□□□□ -0.14
SDC3-203ENST00000471567 MIB2Q96AX9 1013 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 SGCZQ96LD1 299 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 GAL3ST4Q96RP7 486 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 BARD1Q99728 777 aaKnown RBP14.15□□□□□ -0.14
SDC3-203ENST00000471567 C1orf50Q9BV19 199 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 AGPAT4Q9NRZ5 378 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 INTS9Q9NV88 658 aaKnown RBP14.15□□□□□ -0.14
SDC3-203ENST00000471567 HPF1Q9NWY4 346 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 PRODH2Q9UF12 536 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 BCAP29Q9UHQ4 241 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 ATP6V1HQ9UI12 483 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 MAPRE3Q9UPY8 281 aa14.15□□□□□ -0.14
SDC3-203ENST00000471567 A0A087WV62 115 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 PLOD2O00469 737 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 PDPK1O15530 556 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 NME2P1O60361 137 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 OR6B1O95007 311 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 LRATO95237 230 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 RASAL1O95294 804 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 NADKO95544 446 aaPredicted RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 CBX7O95931 251 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 LBPP18428 481 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 PRPS1L1P21108 318 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 NME2P22392 152 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 SOX3P41225 446 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 ST13P50502 369 aaKnown RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 C21orf58P58505 322 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 DCAF7P61962 342 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 PRR30Q53SZ7 412 aaPredicted RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 OGFOD2Q6N063 350 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 LARP4Q71RC2 724 aaKnown RBP eCLIP14.14□□□□□ -0.15
SDC3-203ENST00000471567 WDR75Q8IWA0 830 aaKnown RBP14.14□□□□□ -0.15
SDC3-203ENST00000471567 TAGAPQ8N103 731 aa14.14□□□□□ -0.15
SDC3-203ENST00000471567 NATD1Q8N6N6 113 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms