RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RSPH10BP0C881 870 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CT45A10P0DMU9 189 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 MBL2P11226 248 aaPredicted RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CPN1P15169 458 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF17P17021 662 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 MDKP21741 143 aaPredicted RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 IDSP22304 550 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 IGFBP5P24593 272 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PTPN4P29074 926 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TRIM23P36406 574 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 XCR1P46094 333 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 P2RY4P51582 365 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLC7A2P52569 658 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF131P52739 623 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 EFNA3P52797 238 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 RIPPLY3P57055 190 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 GNB2P62879 340 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TSPY1Q01534 308 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLC34A1Q06495 639 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF33BQ06732 778 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PSG7Q13046 419 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SERTAD2Q14140 314 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 NFE2L1Q14494 772 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF658Q5TYW1 1059 aaPredicted RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLC22A10Q63ZE4 541 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 RHBDD2Q6NTF9 364 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SCARA5Q6ZMJ2 495 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 MSANTD1Q6ZTZ1 278 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 FAM47EQ6ZV65 393 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 GLRX5Q86SX6 157 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ASPGQ86U10 573 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TGIF2LYQ8IUE0 185 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 UNC5CLQ8IV45 518 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 RNF175Q8N4F7 328 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 C14orf178Q8N769 122 aaPredicted RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 OR7G3Q8NG95 312 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 OR6M1Q8NGM8 313 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 DEPDC1BQ8WUY9 529 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 GLYATL1Q969I3 302 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TEKT1Q969V4 418 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ELSPBP1Q96BH3 223 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ERP27Q96DN0 273 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 COG3Q96JB2 828 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CAPNS2Q96L46 248 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CXorf58Q96LI9 332 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CCDC114Q96M63 670 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 GUCD1Q96NT3 240 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PANX3Q96QZ0 392 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PARK7Q99497 189 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF184Q99676 751 aaPredicted RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 EBF4Q9BQW3 602 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 THUMPD3Q9BV44 507 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 C19orf24Q9BVV8 132 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 KRTAP4-1Q9BYQ7 146 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TRIM9Q9C026 710 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CENPMQ9NSP4 180 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 DNAJC17Q9NVM6 304 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SEPT10Q9P0V9 454 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLC2A6Q9UGQ3 507 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TEKT2Q9UIF3 430 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 FBXL5Q9UKA1 691 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 MRTO4Q9UKD2 239 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CDH7Q9ULB5 785 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CCPG1Q9ULG6 757 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 DIMT1Q9UNQ2 313 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 EXOC7Q9UPT5 735 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 KCNK6Q9Y257 313 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CA5BQ9Y2D0 317 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 FLVCR1Q9Y5Y0 555 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 AFF2P51816 1311 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 IGLV8-61A0A075B6I0 122 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 A0A0A6YYD4 124 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SDR42E2A6NKP2 422 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 G3V3Y1 287 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SLC33A1O00400 549 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SLC17A2O00624 439 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 EMC8O43402 210 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NUDT21O43809 227 aaKnown RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 TBCAO75347 108 aaKnown RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SERF1AO75920 110 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 GAS8O95995 478 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 OAS1P00973 400 aaKnown RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ASNSP08243 561 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ALPIP09923 528 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NR2C1P13056 603 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CPA3P15088 417 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 B4GALT1P15291 398 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ZP3P21754 424 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ACP1P24666 158 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SLC12A3P55017 1021 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 GEMP55040 296 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RBP5P82980 135 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF85Q03923 595 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 MSLNQ13421 630 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 KLF5Q13887 457 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 GIT2Q14161 759 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 KRT31Q15323 416 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 HAGHQ16775 308 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 MPPE1Q53F39 396 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NHSL2Q5HYW2 709 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms