RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IRF8Q02556 426 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 TNK1Q13470 666 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 SPRED3Q2MJR0 410 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 C10orf62Q5T681 223 aaPredicted RBP17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 ZNF550Q7Z398 422 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 GPR180Q86V85 440 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 MEIOBQ8N635 442 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 ESAMQ96AP7 390 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 CFAP36Q96G28 342 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 HS3ST6Q96QI5 342 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 PIGQQ9BRB3 760 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 CXorf56Q9H5V9 222 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 PHF11Q9UIL8 331 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 WIF1Q9Y5W5 379 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 A0A1W2PNV4 684 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 C2orf72A6NCS6 295 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 PRAMEF4O60810 478 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 SSTR4P31391 388 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 CD79BP40259 229 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 BUD31P41223 144 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 HSPA7P48741 367 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 RPS13P62277 151 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 TNFRSF17Q02223 184 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 CHIT1Q13231 466 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 PDK4Q16654 411 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 PRAMEF9Q5VWM5 478 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 OR4C11Q6IEV9 310 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 HEPHL1Q6MZM0 1159 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 TCAIMQ8N3R3 496 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 TP53INP1Q96A56 240 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 MAPRE3Q9UPY8 281 aa17.23■□□□□ 0.35
NCKIPSD-209ENST00000470006 GLOD5A6NK44 160 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 RNF223E7ERA6 249 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 TAPBPO15533 448 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 CDH16O75309 829 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 STK16O75716 305 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 GPR75O95800 540 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 POU2F1P14859 743 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 CD22P20273 847 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 CHMP24386 653 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 STARP49675 285 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 TGFBIQ15582 683 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 HP1BP3Q5SSJ5 553 aaPredicted RBP17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 CCDC137Q6PK04 289 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 CHMP1BQ7LBR1 199 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 ZNF473Q8WTR7 871 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 PGM2Q96G03 612 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 SLC39A3Q9BRY0 314 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 OR51B5Q9H339 312 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 SERHLQ9NQF3 203 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 FETUBQ9UGM5 382 aa17.22■□□□□ 0.35
NCKIPSD-209ENST00000470006 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 FAM95CA0A1B0GW59 222 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 WASHC1A8K0Z3 465 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 PLOD2O00469 737 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 CCNT2O60583 730 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 TNFSF13O75888 250 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 SCELO95171 688 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 UGT2B10P36537 528 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 KRTAP1-1Q07627 177 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 DDX39BQ13838 428 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 VEZF1Q14119 521 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 IFNEQ86WN2 208 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 ANKRD49Q8WVL7 239 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 UBE2E3Q969T4 207 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 RGMAQ96B86 450 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 CMTM7Q96FZ5 175 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 UCN2Q96RP3 112 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 CENPKQ9BS16 269 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 OPN3Q9H1Y3 402 aaPredicted RBP17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 ACTR8Q9H981 624 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 KLRF1Q9NZS2 232 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 CLCF1Q9UBD9 225 aa17.21■□□□□ 0.35
NCKIPSD-209ENST00000470006 ABCA1O95477 2261 aa17.21■□□□□ 0.34
NCKIPSD-209ENST00000470006 EXPH5Q8NEV8 1989 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 RAI1Q7Z5J4 1906 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 C16orf97H3BN30 126 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 TGM6O95932 706 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 CLPSP04118 112 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 EPB42P16452 691 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 HNRNPH2P55795 449 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 TAS2R39P59534 338 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 C6orf163Q5TEZ5 329 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 KHDRBS2Q5VWX1 349 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 ANKRD34AQ69YU3 496 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 MED27Q6P2C8 311 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 VWA1Q6PCB0 445 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 TRMT10BQ6PF06 316 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 ADGRE4PQ86SQ3 457 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 GPSM1Q86YR5 675 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 IGDCC3Q8IVU1 814 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 STARD4Q96DR4 205 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 WDR34Q96EX3 536 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 OSBPL11Q9BXB4 747 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 WDR41Q9HAD4 459 aa17.2■□□□□ 0.34
NCKIPSD-209ENST00000470006 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms