RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 EXO5Q9H790 373 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 ALKBH4Q9NXW9 302 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 XPR1Q9UBH6 696 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 KCNN3Q9UGI6 736 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 PCDHA9Q9Y5H5 950 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 ITPR3Q14573 2671 aa13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 ANKHD1Q8IWZ3 2542 aaKnown RBP13.58□□□□□ -0.24
SDCCAG3-209ENST00000468963 CAPN14A8MX76 684 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 TP53I11O14683 189 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 SMIM24O75264 130 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 RPS17P08708 135 aaKnown RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 CPMP14384 443 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 SOX18P35713 384 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 FBXW4P57775 412 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 IFT88Q13099 833 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 TSNAXIP1Q2TAA8 658 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 SGO1Q5FBB7 561 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 CCNYL2Q5T2Q4 361 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 FNDC7Q5VTL7 733 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 RPS27LQ71UM5 84 aaKnown RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 GALNT12Q8IXK2 581 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ULK2Q8IYT8 1036 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 NOA1Q8NC60 698 aaKnown RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 C17orf47Q8NEP4 570 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 OR7G1Q8NGA0 311 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 DIO2Q92813 273 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 TM4SF18Q96CE8 201 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 JSRP1Q96MG2 331 aaPredicted RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 DOHHQ9BU89 302 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 C1QTNF3Q9BXJ4 246 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ANGPTL4Q9BY76 406 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF180Q9UJW8 692 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF225Q9UK10 706 aa13.57□□□□□ -0.24
SDCCAG3-209ENST00000468963 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 MPDZO75970 2070 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 AHRRA9YTQ3 701 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 KRT38O76015 456 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 SNX4O95219 450 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 PDYNP01213 254 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 PORP16435 677 aaPredicted RBP13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 CNTFP26441 200 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 ARL1P40616 181 aaPredicted RBP13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 CASP3P42574 277 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRPC1P48995 793 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 CDH13P55290 713 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 GALNT1Q10472 559 aaPredicted RBP13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 MAP4K2Q12851 820 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 DUSP8Q13202 625 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 HLA-DQA1Q5Y7H0 255 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 BICRALQ6AI39 1079 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 LETMD1Q6P1Q0 360 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 SPNS3Q6ZMD2 512 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 COMMD6Q7Z4G1 85 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 CLYBLQ8N0X4 340 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 IFT81Q8WYA0 676 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF559Q9BR84 538 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 MRPL46Q9H2W6 279 aaKnown RBP13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 UBQLN3Q9H347 655 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 MED12Q93074 2177 aa13.56□□□□□ -0.24
SDCCAG3-209ENST00000468963 C1orf226A1L170 272 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 TRIM49D1C9J1S8 452 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 EPPINO95925 133 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 HPNP05981 417 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 ABCB1P08183 1280 aaPredicted RBP13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 NAGAP17050 411 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 TSPAN8P19075 237 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 NT5EP21589 574 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 HSD17B3P37058 310 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 MAPK12P53778 367 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 CRYZQ08257 329 aaKnown RBP13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 SLC25A35Q3KQZ1 300 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 FAM219BQ5XKK7 198 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 SLC48A1Q6P1K1 146 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 FAM111BQ6SJ93 734 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 MMP21Q8N119 569 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 LIX1Q8N485 282 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 CTHRC1Q96CG8 243 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 ZNF597Q96LX8 424 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 RILPQ96NA2 401 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 FMO2Q99518 471 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 TIMP4Q99727 224 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 NXF5Q9H1B4 397 aaKnown RBP13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 ELOVL6Q9H5J4 265 aa13.55□□□□□ -0.24
SDCCAG3-209ENST00000468963 BRF2Q9HAW0 419 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms