RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 CUL3Q13618 768 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 DEFB113Q30KQ7 82 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 EIPR1Q53HC9 387 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 HLA-DQA1Q5Y7H0 255 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 PACS2Q86VP3 889 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 NUDT13Q86X67 352 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 KIF18BQ86Y91 864 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 GALNT12Q8IXK2 581 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 WFDC11Q8NEX6 87 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 LINC01560Q8TB33 94 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 NXNL1Q96CM4 212 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 SECISBP2Q96T21 854 aaKnown RBP17.21■□□□□ 0.35
SRSF4-202ENST00000466448 UGT2B28Q9BY64 529 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 WDR41Q9HAD4 459 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 WHRNQ9P202 907 aa17.21■□□□□ 0.35
SRSF4-202ENST00000466448 MBD3L4A6NDZ8 208 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 MBD3L3A6NE82 208 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 LRRC14BA6NHZ5 514 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 MBD3L5A6NJ08 208 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 CD8B2A6NJW9 211 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 EEF1E1-BLOC1S5C9J1V9 151 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 PGRMC2O15173 223 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 EEF1E1O43324 174 aaKnown RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 GBAP04062 536 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 PAFAH1B1P43034 410 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 TMED10P49755 219 aaKnown RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 NEK2P51955 445 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 GNG11P61952 73 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 IRF9Q00978 393 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 FUT7Q11130 342 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 KEAP1Q14145 624 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 SF3B4Q15427 424 aaKnown RBP eCLIP17.2■□□□□ 0.341e-11■■■■□ 21.4
SRSF4-202ENST00000466448 CPSF6Q16630 551 aaKnown RBP eCLIP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 PFKFB4Q16877 469 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 WIPI1Q5MNZ9 446 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 OR52E8Q6IFG1 317 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 PRR22Q8IZ63 422 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 CENPLQ8N0S6 344 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 ZNF615Q8N8J6 731 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 MBD3L2Q8NHZ7 208 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 KCTD4Q8WVF5 259 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 ADIPOR1Q96A54 375 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 REPS1Q96D71 796 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 WDYHV1Q96HA8 205 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 NAPGQ99747 312 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-202ENST00000466448 ERP44Q9BS26 406 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 OR10A5Q9H207 317 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 PLEKHF2Q9H8W4 249 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 GRHL1Q9NZI5 618 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 JKAMPQ9P055 326 aa17.2■□□□□ 0.34
SRSF4-202ENST00000466448 SYCE1LA8MT33 242 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 GSTA2P09210 222 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 CTSSP25774 331 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 NRG3P56975 720 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 SORDQ00796 357 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 TOMM20Q15388 145 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 RHEBL1Q8TAI7 183 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 WDR20Q8TBZ3 569 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 NTNG2Q96CW9 530 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 TMEM41AQ96HV5 264 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 ACOT9Q9Y305 439 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 RNF11Q9Y3C5 154 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 ABCA2Q9BZC7 2435 aa17.19■□□□□ 0.34
SRSF4-202ENST00000466448 ABCA4P78363 2273 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 GNB5O14775 395 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 UGDHO60701 494 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 GFAPP14136 432 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 PIK3R1P27986 724 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 ABCD3P28288 659 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 PTPN6P29350 595 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 OPRM1P35372 400 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 SOX18P35713 384 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 NAGLUP54802 743 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 TIGD3Q6B0B8 471 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 C9orf106Q8NAJ2 232 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 C17orf47Q8NEP4 570 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 ABTB1Q969K4 478 aaPredicted RBP17.18■□□□□ 0.34
SRSF4-202ENST00000466448 SMR3AQ99954 134 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 CALHM2Q9HA72 323 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 PSD3Q9NYI0 1048 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 DTX4Q9Y2E6 619 aa17.18■□□□□ 0.34
SRSF4-202ENST00000466448 FAM187AA6NFU0 413 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 CLCA1A8K7I4 914 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 FOXE1O00358 373 aaPredicted RBP17.17■□□□□ 0.34
SRSF4-202ENST00000466448 ABCB1P08183 1280 aaPredicted RBP17.17■□□□□ 0.34
SRSF4-202ENST00000466448 GPX3P22352 226 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 HOXC12P31275 282 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 PIK3CGP48736 1102 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 ALDH18A1P54886 795 aaKnown RBP17.17■□□□□ 0.34
SRSF4-202ENST00000466448 RPP38P78345 283 aaKnown RBP17.17■□□□□ 0.34
SRSF4-202ENST00000466448 FOXF2Q12947 444 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 GTF2H2Q13888 395 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 GTF2H2CQ6P1K8 395 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 GOLGA7Q7Z5G4 137 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 YRDCQ86U90 279 aaKnown RBP17.17■□□□□ 0.34
SRSF4-202ENST00000466448 L3MBTL4Q8NA19 623 aa17.17■□□□□ 0.34
SRSF4-202ENST00000466448 FAM83FQ8NEG4 500 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms