RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SOWAHCQ53LP3 525 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF628Q5EBL2 1059 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 HACD4Q5VWC8 232 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 LRFN4Q6PJG9 635 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 RNF165Q6ZSG1 346 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CACUL1Q86Y37 369 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 PLA2G15Q8NCC3 412 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CHST14Q8NCH0 376 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR10A6Q8NH74 314 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC9A6Q92581 669 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ULK4Q96C45 1275 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 NXPE2Q96DL1 559 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 DIRAS2Q96HU8 199 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ITCHQ96J02 903 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 RBP7Q96R05 134 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 GAREM1Q9H706 876 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CATSPERZQ9NTU4 200 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZSCAN32Q9NX65 697 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 MRPS7Q9Y2R9 242 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SIGLEC6O43699 453 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 JCHAINP01591 159 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 IFNA4P05014 189 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC2A2P11168 524 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 TPH1P17752 444 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 STOMP27105 288 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 MAPK1P28482 360 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SDC2P34741 201 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 FNTBP49356 437 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 GZMMP51124 257 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 GEMP55040 296 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ITGA1P56199 1179 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ITKQ08881 620 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ABHD18Q0P651 414 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ESRP1Q6NXG1 681 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZC3H14Q6PJT7 736 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CEP68Q76N32 757 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 HSD17B13Q7Z5P4 300 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ATG16L2Q8NAA4 619 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CAMKVQ8NCB2 501 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR4D10Q8NGI6 311 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR9Q1Q8NGQ5 310 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR6K2Q8NGY2 324 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 TEX47Q8TBZ9 253 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 GANCQ8TET4 914 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC13A3Q8WWT9 602 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 OR2M2Q96R28 347 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 THUMPD3Q9BV44 507 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 CPEB1Q9BZB8 566 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 TPSD1Q9BZJ3 242 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 SLC35C2Q9NQQ7 365 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 EPHA6Q9UF33 1036 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 EVLQ9UI08 416 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 ZNF490Q9ULM2 529 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 PCDHGA2Q9Y5H1 932 aa10.9□□□□□ -0.66
TRAPPC3-205ENST00000462715 TRBV5-3A0A0A0MS03 114 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 GLYATL1P3A0A0U1RQE8 302 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 KPNA3O00505 521 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 MID1O15344 667 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 LEFTY1O75610 366 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 IL6P05231 212 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 FABP3P05413 133 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 STSP08842 583 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 GAAP10253 952 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 AZGP1P25311 298 aaKnown RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 SERPINA4P29622 427 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 CNR2P34972 360 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 CD96P40200 585 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 MEOX2P50222 304 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 RAB13P51153 203 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PUDPQ08623 228 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ST3GAL4Q11206 333 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 MAD2L1Q13257 205 aaPredicted RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 MEDAGQ5VYS4 303 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 USP30Q70CQ3 517 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 TMEM151BQ8IW70 566 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 NELL1Q92832 810 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 UPRTQ96BW1 309 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ARL5BQ96KC2 179 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 TMEM43Q9BTV4 400 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PPP1R3EQ9H7J1 279 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 REEP1Q9H902 201 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ABCB9Q9NP78 766 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 VAPAQ9P0L0 249 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 AASSQ9UDR5 926 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 SSR3Q9UNL2 185 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ZFR2Q9UPR6 939 aaKnown RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PTGDR2Q9Y5Y4 395 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 KERAO60938 352 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 CTSLP07711 333 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 FDXRP22570 491 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 CALCRP30988 508 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms