RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PPT2Q9UMR5 302 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SSUH2Q9Y2M2 353 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SDK1Q7Z5N4 2213 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 PRORSD1PA6NEY8 169 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 BTN3A3O00478 584 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 AP3D1O14617 1153 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ASNA1O43681 348 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 KRT8P05787 483 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ANXA6P08133 673 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ACAA1P09110 424 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 COX7A2P14406 83 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SLC6A2P23975 617 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 CSNK1EP49674 416 aaKnown RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 BMXP51813 675 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ATXN3P54252 364 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 HHEXQ03014 270 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 ZNF763Q0D2J5 394 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 DBPQ10586 325 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 LRRC36Q1X8D7 754 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 DPY19L1Q2PZI1 675 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 HKDC1Q2TB90 917 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 THEM4Q5T1C6 240 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 GALNT18Q6P9A2 607 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 GPR180Q86V85 440 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 OR4D10Q8NGI6 311 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 NECAB3Q96P71 396 aaPredicted RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 NT5DC2Q9H857 520 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SLC6A20Q9NP91 592 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 IFT46Q9NQC8 304 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 AHSPQ9NZD4 102 aa9.83□□□□□ -0.84
HERC4-207ENST00000460168 SNRNP200O75643 2136 aaKnown RBP9.83□□□□□ -0.84
HERC4-207ENST00000460168 A0A0C4DFX4 3053 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TRBC2A0A5B9 178 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 NME4O00746 187 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 BCAT2O15382 392 aaPredicted RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 LCMT2O60294 686 aaKnown RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 KLK1P06870 262 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TGM1P22735 817 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 HRH2P25021 359 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 ETV5P41161 510 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 KIR3DL1P43629 444 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 AFF3P51826 1226 aaKnown RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 HNRNPKP61978 463 aaKnown RBP eCLIP9.82□□□□□ -0.84
HERC4-207ENST00000460168 KIR2DS3Q14952 304 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 KHDRBS2Q5VWX1 349 aaKnown RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 GKN2Q86XP6 184 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 RIMKLAQ8IXN7 391 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 METTL4Q8N3J2 472 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 LMX1AQ8TE12 382 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SLC26A7Q8TE54 656 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 JADE3Q92613 823 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 ASB9Q96DX5 294 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 RADILQ96JH8 1075 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 PPM1MQ96MI6 270 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TMEM74Q96NL1 305 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 CITED4Q96RK1 184 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 MS4A8Q9BY19 250 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 DUSP15Q9H1R2 295 aaPredicted RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 SLC6A15Q9H2J7 730 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 PRDM9Q9NQV7 894 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 KLHL9Q9P2J3 617 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 ABCD2Q9UBJ2 740 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 KLHL20Q9Y2M5 609 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 MYO15AQ9UKN7 3530 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 CROCCQ5TZA2 2017 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TSPAN4O14817 238 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TMEM127O75204 238 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 DHFRP00374 187 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 HPCAL1P37235 193 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 FNTBP49356 437 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 P2RY4P51582 365 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SRSF11Q05519 484 aaKnown RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 PWP1Q13610 501 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TRIM25Q14258 630 aaKnown RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 RABL3Q5HYI8 236 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 DLEU7Q6UYE1 221 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 ANKRD46Q86W74 232 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 ZNF761Q86XN6 746 aaPredicted RBP9.82□□□□□ -0.84
HERC4-207ENST00000460168 CADM2Q8N3J6 435 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 TMEM132CQ8N3T6 1108 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 OR7A2PQ8NGA2 310 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 DNASE2BQ8WZ79 361 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 GTF2H4Q92759 462 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 F2RL3Q96RI0 385 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 PINK1Q9BXM7 581 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 NANOGQ9H9S0 305 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 MAT2BQ9NZL9 334 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SPASTQ9UBP0 616 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SNX13Q9Y5W8 968 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 SESN1Q9Y6P5 492 aa9.82□□□□□ -0.84
HERC4-207ENST00000460168 THADAQ6YHU6 1953 aa9.81□□□□□ -0.84
HERC4-207ENST00000460168 MEN1O00255 615 aa9.81□□□□□ -0.84
HERC4-207ENST00000460168 PLPP1O14494 284 aa9.81□□□□□ -0.84
HERC4-207ENST00000460168 SCAMP2O15127 329 aaKnown RBP9.81□□□□□ -0.84
HERC4-207ENST00000460168 LAMTOR5O43504 91 aa9.81□□□□□ -0.84
HERC4-207ENST00000460168 CLEC3AO75596 197 aa9.81□□□□□ -0.84
HERC4-207ENST00000460168 WDPCPO95876 746 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms