RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 TM9SF3Q9HD45 589 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 IL1RAPQ9NPH3 570 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 DDX18Q9NVP1 670 aaKnown RBP2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 NMRK1Q9NWW6 199 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 CLIP2Q9UDT6 1046 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 SNX6Q9UNH7 406 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 TMED5Q9Y3A6 229 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 ATRXP46100 2492 aa2.79□□□□□ -1.96
R3HDM1-212ENST00000456040 HEG1Q9ULI3 1381 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TRBV2A0A0J9YWF9 115 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 MAGEB3O15480 346 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PPIP5K2O43314 1243 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 ZNF749O43361 778 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PRAF2O60831 178 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PGLSO95336 258 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CXCL14O95715 111 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PCCBP05166 539 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SPP1P10451 314 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 GOT1P17174 413 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 FUT1P19526 365 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 GLRA2P23416 452 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CCND2P30279 289 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TIA1P31483 386 aaKnown RBP eCLIP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 HSPA1LP34931 641 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 MAGEB1P43366 347 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 MTIF2P46199 727 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 OR3A3P47888 321 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TRPC1P48995 793 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 MTTPP55157 894 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 MECOMQ03112 1051 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SPP2Q13103 211 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SCGB2A2Q13296 93 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TNK1Q13470 666 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SNX1Q13596 522 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PDE7AQ13946 482 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 GRB14Q14449 540 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SIX1Q15475 284 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 RNF212Q495C1 297 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 USH1GQ495M9 461 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 KCTD21Q4G0X4 260 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 EPC2Q52LR7 807 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 HERC4Q5GLZ8 1057 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 C9orf66Q5T8R8 295 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 RNLSQ5VYX0 342 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TXNRD3NBQ6F5E7 133 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SULT1C3Q6IMI6 304 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 REG3GQ6UW15 175 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 C15orf52Q6ZUT6 534 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TRMT11Q7Z4G4 463 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 COX8CQ7Z4L0 72 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PRSS42Q7Z5A4 293 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 GPR141Q7Z602 305 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TAF8Q7Z7C8 310 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SYVN1Q86TM6 617 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CARM1Q86X55 608 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 C4orf19Q8IY42 314 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 DND1Q8IYX4 353 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 ZBED8Q8IZ13 594 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TEX26Q8N6G2 289 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 KIAA0895Q8NCT3 520 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TMEM185AQ8NFB2 350 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 OR56B2PQ8NGI1 322 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 OR52M1Q8NGK5 317 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 UBLCP1Q8WVY7 318 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SELENOMQ8WWX9 145 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 RAD54LQ92698 747 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CCDC51Q96ER9 411 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TAAR6Q96RI8 345 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 ALKBH7Q9BT30 221 aaPredicted RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 TPPP3Q9BW30 176 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 NACAP1Q9BZK3 213 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 DDX47Q9H0S4 455 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 CARD9Q9H257 536 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 C10orf88Q9H8K7 445 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 GORASP2Q9H8Y8 452 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PNPLA3Q9NST1 481 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 RBM28Q9NW13 759 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 NDUFA13Q9P0J0 144 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 ZNF581Q9P0T4 197 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 DNPEPQ9ULA0 475 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 SATB2Q9UPW6 733 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 RUVBL2Q9Y230 463 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 EXOC6BQ9Y2D4 811 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 PLEKHA6Q9Y2H5 1048 aa2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 HBS1LQ9Y450 684 aaKnown RBP2.78□□□□□ -1.96
R3HDM1-212ENST00000456040 ZNF608Q9ULD9 1512 aaPredicted RBP2.78□□□□□ -1.97
R3HDM1-212ENST00000456040 PTPRGP23470 1445 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 MYOM3Q5VTT5 1437 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 SETD5Q9C0A6 1442 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 NSD2O96028 1365 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 SUPT6HQ7KZ85 1726 aaKnown RBP2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 CFAP43Q8NDM7 1665 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 ARPC4-TTLL3A0A0A6YYG9 625 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 TRGV8A0A0C4DH27 118 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 FAM25EA8MYX2 175 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 KBTBD13C9JR72 458 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 E5RGE8 158 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 NPIPA3F8WFD2 350 aa2.77□□□□□ -1.97
R3HDM1-212ENST00000456040 H0YIG0 161 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms