RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.422e-12■■■■■ 44.5
PSMC4-202ENST00000455878 SLC13A2Q13183 592 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 TERF2Q15554 542 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 GXYLT1Q4G148 440 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 TOR1AIP1Q5JTV8 583 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 TMEM200AQ86VY9 491 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
PSMC4-202ENST00000455878 GPALPP1Q8IXQ4 340 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 CA13Q8N1Q1 262 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 APCDD1LQ8NCL9 501 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 OR5M3Q8NGP4 307 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 PIWIL2Q8TC59 973 aaKnown RBP12.41□□□□□ -0.42
PSMC4-202ENST00000455878 SMIM10Q96HG1 83 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 C3orf30Q96M34 536 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 NUF2Q9BZD4 464 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 OR51B5Q9H339 312 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 PRTFDC1Q9NRG1 225 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 HPF1Q9NWY4 346 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
PSMC4-202ENST00000455878 HRH3Q9Y5N1 445 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 USH1CQ9Y6N9 552 aa12.41□□□□□ -0.42
PSMC4-202ENST00000455878 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 NPIPA2E9PIF3 369 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 NPIPA3F8WFD2 350 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 FOXE1O00358 373 aaPredicted RBP12.4□□□□□ -0.42
PSMC4-202ENST00000455878 ZNF195O14628 629 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 HSD17B7P56937 341 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 CSTF3Q12996 717 aaKnown RBP12.4□□□□□ -0.42
PSMC4-202ENST00000455878 MYBPHQ13203 477 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 XKR7Q5GH72 579 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 IL20RBQ6UXL0 311 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 SLC22A16Q86VW1 577 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
PSMC4-202ENST00000455878 DMRTC2Q8IXT2 367 aaPredicted RBP12.4□□□□□ -0.42
PSMC4-202ENST00000455878 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 MARVELD2Q8N4S9 558 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 ASB15Q8WXK1 588 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 NCLNQ969V3 563 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 CHMP6Q96FZ7 201 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 SEC16BQ96JE7 1060 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 F2RL3Q96RI0 385 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 NPLQ9BXD5 320 aaPredicted RBP12.4□□□□□ -0.42
PSMC4-202ENST00000455878 RABEP2Q9H5N1 569 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 TNFRSF10DQ9UBN6 386 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 KCNN3Q9UGI6 736 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 ADGRE2Q9UHX3 823 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 SLC12A4Q9UP95 1085 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 CCL27Q9Y4X3 112 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 CLCA3PQ9Y6N3 262 aa12.4□□□□□ -0.42
PSMC4-202ENST00000455878 A0A0G2JN53 185 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ATP6AP2A0A1C7CYW4 349 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 SYNDIG1LA6NDD5 238 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 SDHDO14521 159 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 HDAC3O15379 428 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 B3GALT2O43825 422 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ATP6AP2O75787 350 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 OR2J2O76002 312 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 TOXO94900 526 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 NADKO95544 446 aaPredicted RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 IFNA16P05015 189 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 HOXD4P09016 255 aaPredicted RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 HSD3B1P14060 373 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ALOX15P16050 662 aaPredicted RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 IGFBP2P18065 325 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 TNNI3P19429 210 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 DRD4P21917 467 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 HSD3B2P26439 372 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 MSX1P28360 303 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 IMPG1Q17R60 797 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ADPRMQ3LIE5 342 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 C10orf62Q5T681 223 aaPredicted RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 KHDRBS2Q5VWX1 349 aaKnown RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ZNF585AQ6P3V2 769 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 TRIM46Q7Z4K8 759 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 UBE3DQ7Z6J8 389 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 PSD4Q8NDX1 1056 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 MS4A6EQ96DS6 147 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 CMTM7Q96FZ5 175 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 SORBS1Q9BX66 1292 aaKnown RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 REXO4Q9GZR2 422 aaKnown RBP12.39□□□□□ -0.43
PSMC4-202ENST00000455878 BRF2Q9HAW0 419 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 VTI1BQ9UEU0 232 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 ADAM21Q9UKJ8 722 aa12.39□□□□□ -0.43
PSMC4-202ENST00000455878 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 SLC28A1O00337 649 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 RTCAO00442 366 aaKnown RBP12.38□□□□□ -0.43
PSMC4-202ENST00000455878 PLPP1O14494 284 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 BCKDKO14874 412 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 DIAPH2O60879 1101 aa12.38□□□□□ -0.43
PSMC4-202ENST00000455878 SHOX2O60902 331 aaPredicted RBP12.38□□□□□ -0.43
PSMC4-202ENST00000455878 HK2P52789 917 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms