RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TRIM40Q6P9F5 258 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ZNF793Q6ZN11 406 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DGAT2L6Q6ZPD8 337 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SYDE1Q6ZW31 735 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CMC1Q7Z7K0 106 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 KIF18BQ86Y91 864 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CTAGE3PQ8IX95 158 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CYP4Z2PQ8N1L4 340 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 KRT78Q8N1N4 520 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ACOT4Q8N9L9 421 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PSD4Q8NDX1 1056 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 OR2L5Q8NG80 312 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 OR10Q1Q8NGQ4 319 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 C16orf52Q8NHV5 167 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 FAM57AQ8TBR7 257 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ASB15Q8WXK1 588 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKRD7Q92527 254 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ANKRD9Q96BM1 317 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 LRRC39Q96DD0 335 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SCYL1Q96KG9 808 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SERINC2Q96SA4 455 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 NAPGQ99747 312 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 VKORC1Q9BQB6 163 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CCDC77Q9BR77 488 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 NPLQ9BXD5 320 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 OR8D2Q9GZM6 311 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DERL2Q9GZP9 239 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ENKD1Q9H0I2 346 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 OR51B5Q9H339 312 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 RHOJQ9H4E5 214 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 NT5DC2Q9H857 520 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 GRPEL1Q9HAV7 217 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CLK4Q9HAZ1 481 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DNAJC11Q9NVH1 559 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 HPF1Q9NWY4 346 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ALKBH4Q9NXW9 302 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PTBP2Q9UKA9 531 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CORO1CQ9ULV4 474 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DAPP1Q9UN19 280 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 RNF6Q9Y252 685 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 KLF13Q9Y2Y9 288 aaPredicted RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 YARS2Q9Y2Z4 477 aaKnown RBP4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 MMACHCQ9Y4U1 282 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 LIPGQ9Y5X9 500 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 SAR1BQ9Y6B6 198 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 CLCA3PQ9Y6N3 262 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 HEATR5AQ86XA9 2040 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 DOCK7Q96N67 2140 aa4.34□□□□□ -1.71
GTF3C3-208ENST00000455546 ABCA4P78363 2273 aa4.34□□□□□ -1.72
GTF3C3-208ENST00000455546 POLQO75417 2590 aa4.34□□□□□ -1.72
GTF3C3-208ENST00000455546 CSMD2Q7Z408 3487 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CCDC168Q8NDH2 2452 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TCRBV9S1A1TA0A576 114 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 OR14I1A6ND48 311 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 GLOD5A6NK44 160 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 UBXN8O00124 270 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ACOT7O00154 380 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RAD51CO43502 376 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TOXO94900 526 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 LRATO95237 230 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 C1QAP02745 245 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 S100BP04271 92 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TUBB4AP04350 444 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CCL3P10147 92 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 STMN1P16949 149 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CNR1P21554 472 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 CPN2P22792 545 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ATP5A1P25705 553 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PTGER4P35408 488 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 GGT5P36269 586 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PIGAP37287 484 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 MAGEA5P43359 124 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PIK3CGP48736 1102 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 NEK2P51955 445 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PLTPP55058 493 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 NUP107P57740 925 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ERVFRD-1P60508 538 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 IRF8Q02556 426 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 C2orf54Q08AI8 447 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ASPHQ12797 758 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 SLAMF1Q13291 335 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 DDX39BQ13838 428 aaKnown RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 EFTUD2Q15029 972 aaKnown RBP eCLIP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 PDK4Q16654 411 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 HIST2H2ACQ16777 129 aaPredicted RBP4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 AP5B1Q2VPB7 878 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 ADPRMQ3LIE5 342 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM219BQ5XKK7 198 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 C18orf63Q68DL7 685 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 HIST2H2AA3Q6FI13 130 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 RTL6Q6ICC9 239 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM64Q6YI46 380 aa4.33□□□□□ -1.72
GTF3C3-208ENST00000455546 HSDL2Q6YN16 418 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms