RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 LSSP48449 732 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 GAS6Q14393 721 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 NPTX1Q15818 432 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 LRRC25Q8N386 305 aaPredicted RBP12.87□□□□□ -0.35
CLK3-203ENST00000454830 GPBAR1Q8TDU6 330 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 KIR2DS5A0A0G2JLQ3 304 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 A0A0G2JNG1 304 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 A6NCN8 305 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 OR5K4A6NMS3 321 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 KIR2DS3K7RE56 304 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 TBX19O60806 448 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 MFN2O95140 757 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 PTNP21246 168 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 MAP2K4P45985 399 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 CCR5P51681 352 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 OCA2Q04671 838 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 RUNX2Q13950 521 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLK3-203ENST00000454830 KIR2DS5Q14953 304 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SPARTQ8N0X7 666 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SIX5Q8N196 739 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 C11orf16Q9NQ32 467 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 A0A0J9YY10 115 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SHISA7A6NL88 538 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SGK494L7N484 410 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 ALDH4A1P30038 563 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 AVPR1BP47901 424 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 LSM3P62310 102 aaKnown RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 ROR2Q01974 943 aaKnown RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 IL18R1Q13478 541 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ZC3H12BQ5HYM0 836 aaKnown RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 MRM1Q6IN84 353 aaKnown RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 B3GNT8Q7Z7M8 397 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 METTL27Q8N6F8 245 aaPredicted RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 ZNF614Q8N883 585 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SUN3Q8TAQ9 357 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 RORBQ92753 470 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 HLA-CQ95604 372 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ROGDIQ9GZN7 287 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 NMNAT1Q9HAN9 279 aaPredicted RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 ACER3Q9NUN7 267 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 POFUT2Q9Y2G5 429 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 NAALAD2Q9Y3Q0 740 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ZNF217O75362 1048 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 XCR1P46094 333 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 LIM2P55344 173 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
CLK3-203ENST00000454830 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 CCDC80Q76M96 950 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 RRM2BQ7LG56 351 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 GPR32P1Q8NGA4 272 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ELP4Q96EB1 424 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 LHPPQ9H008 270 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 EVA1BQ9NVM1 165 aa12.86□□□□□ -0.35
CLK3-203ENST00000454830 ST6GAL1P15907 406 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 COLEC12Q5KU26 742 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
CLK3-203ENST00000454830 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 TBC1D20Q96BZ9 403 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 HSPA12BQ96MM6 686 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 OR7D2Q96RA2 312 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 SERINC2Q96SA4 455 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 LRRC61Q9BV99 259 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 SLC9B1P1A6NJY1 282 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 IL9P15248 144 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 TNNI3P19429 210 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 CD38P28907 300 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 TTKP33981 857 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 RYKP34925 604 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 TNFRSF17Q02223 184 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 TARDBPQ13148 414 aaKnown RBP eCLIP12.85□□□□□ -0.353e-6■■■□□ 14.6
CLK3-203ENST00000454830 GNA13Q14344 377 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 SHISA5Q8N114 240 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 AVL9Q8NBF6 648 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 RNF31Q96EP0 1072 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 ARMC7Q9H6L4 198 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 THSD1Q9NS62 852 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 IGHV1OR15-9A0A0B4J2B8 117 aa12.85□□□□□ -0.35
CLK3-203ENST00000454830 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms