RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 DOCK7Q96N67 2140 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CCDC189A1A4V9 331 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CCNT2O60583 730 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 TMCC2O75069 709 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 ACSL3O95573 720 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 TGFB1P01137 390 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CLPSP04118 112 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CCDC166P0CW27 439 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 PCNAP12004 261 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CD1DP15813 335 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 STMN1P16949 149 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 KRT15P19012 456 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 PTX3P26022 381 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 PTPN6P29350 595 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 FBXW4P57775 412 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 FUT7Q11130 342 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 C6orf163Q5TEZ5 329 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 OR52E8Q6IFG1 317 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 MRM1Q6IN84 353 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 SLC30A6Q6NXT4 461 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CXXC5Q7LFL8 322 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 C9orf106Q8NAJ2 232 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 OR7G1Q8NGA0 311 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 STAG3L4Q8TBR4 150 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CDKL2Q92772 493 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 UBXN10Q96LJ8 280 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 OSBPL9Q96SU4 736 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 DDX31Q9H8H2 851 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CXorf21Q9HAI6 301 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 NUDT4Q9NZJ9 180 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 OPTCQ9UBM4 332 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CFL2Q9Y281 166 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 SLC6A5Q9Y345 797 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 PCDHGA11Q9Y5H2 935 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
LYSMD3-202ENST00000453259 NINQ8N4C6 2090 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 A0A1W2PPR1 153 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 A8MXE2 369 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 H7C1Q1 480 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 K7EPI3 171 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 PLPP1O14494 284 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 MSTNO14793 375 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 UGDHO60701 494 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 EPB42P16452 691 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 NAGLUP54802 743 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 CUL3Q13618 768 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 TOMM20Q15388 145 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 LIPJQ5W064 366 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 HUS1BQ8NHY5 278 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 MDFIQ99750 246 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 OR51B5Q9H339 312 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 ACTR8Q9H981 624 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 PPP2R2CQ9Y2T4 447 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 ASB4Q9Y574 426 aa13.02□□□□□ -0.33
LYSMD3-202ENST00000453259 A0A0A6YYD5 115 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 E7ESA3 106 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 H0Y3Z8 333 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 H0YIV9 168 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 SNPHO15079 494 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 ACOX3O15254 700 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 CTIFO43310 598 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 CBR3O75828 277 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 LRATO95237 230 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 ABCD3P28288 659 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 MC3RP41968 323 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 RPS13P62277 151 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 PSPHP78330 225 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 OR4D1Q15615 310 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 ZKSCAN8Q15776 578 aaPredicted RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 EIPR1Q53HC9 387 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 WIPI1Q5MNZ9 446 aaPredicted RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 HP1BP3Q5SSJ5 553 aaPredicted RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 DCST1Q5T197 706 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 OR2A2Q6IF42 318 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 AAGABQ6PD74 315 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 CYP20A1Q6UW02 462 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 CYS1Q717R9 158 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 NUDT13Q86X67 352 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 ZNF615Q8N8J6 731 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 GBP7Q8N8V2 638 aaPredicted RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 Q96MF0 132 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 GPR22Q99680 433 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 CPNE1Q99829 537 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 GSX2Q9BZM3 304 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 DDX47Q9H0S4 455 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-202ENST00000453259 OR10A5Q9H207 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms