RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 RACGAP1Q9H0H5 632 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 KLHL28Q9NXS3 571 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 SLC23A2Q9UGH3 650 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 TEKT2Q9UIF3 430 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 CORO2BQ9UQ03 480 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 ERVK-11Q9UQG0 969 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 CHD5Q8TDI0 1954 aa10.6□□□□□ -0.71
DDR1-239ENST00000452441 TRBV5-3A0A0A0MS03 114 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 C2orf92A0A1B0GVN3 265 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FABP12A6NFH5 140 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 AP3D1O14617 1153 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 IDH3BO43837 385 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 HNRNPA1P09651 372 aaKnown RBP eCLIP10.59□□□□□ -0.71
DDR1-239ENST00000452441 HPGDP15428 266 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 PTX3P26022 381 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 GJA4P35212 333 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 MMP12P39900 470 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLC9A3P48764 834 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FBXW4P57775 412 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 MTAPQ13126 283 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLAMF1Q13291 335 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 KEAP1Q14145 624 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF791Q3KP31 576 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 TRIM69Q86WT6 500 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CALHM3Q86XJ0 350 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CELF2-AS1Q8N7Q2 184 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OR51A7Q8NH64 312 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SMPDL3AQ92484 453 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLC35B4Q969S0 331 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF689Q96CS4 500 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 LRRC3BQ96PB8 259 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 DPH7Q9BTV6 452 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 TEX12Q9BXU0 123 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SIAEQ9HAT2 523 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FBXO8Q9NRD0 319 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SPATA7Q9P0W8 599 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 NTNG1Q9Y2I2 539 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 WBP11Q9Y2W2 641 aaKnown RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 PSMD9O00233 223 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 LINC01565O15544 149 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 PVRP15151 417 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 HOXA9P31269 272 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 P2RY2P41231 377 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FAM83HQ6ZRV2 1179 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 PRSS48Q7RTY5 328 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 AMER3Q8N944 861 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 MINDY2Q8NBR6 621 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OR10H4Q8NGA5 316 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF566Q969W8 418 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 RDH14Q9HBH5 336 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CYP8B1Q9UNU6 501 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 POFUT2Q9Y2G5 429 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLC27A6Q9Y2P4 619 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 APC2O95996 2303 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OTOL1A6NHN0 477 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 CLDN24A6NM45 220 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CLCA1A8K7I4 914 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF821O75541 412 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 NCR1O76036 304 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CLEC2LP0C7M8 214 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 PSKH1P11801 424 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF77Q15935 545 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF311Q5JNZ3 666 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 LILRA6Q6PI73 481 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 DPPA4Q7L190 304 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OXR1Q8N573 874 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OR51G2Q8NGK0 314 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZBED6CLQ96FA7 236 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 EGLN3Q9H6Z9 239 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 PCDHGB1Q9Y5G3 927 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 PCDHGA6Q9Y5G7 932 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ZNF780BQ9Y6R6 833 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CD8B2A6NJW9 211 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CD8BP10966 210 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLC15A1P46059 708 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CRISP1P54107 249 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 OR2B6P58173 313 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SELENBP1Q13228 472 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 SLC9A5Q14940 896 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 ITPRIPL2Q3MIP1 535 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 NDUFAF5Q5TEU4 345 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 STEAP3Q658P3 488 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FIGNL1Q6PIW4 674 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 NUDT13Q86X67 352 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CCDC71Q8IV32 467 aaPredicted RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 CYP4Z2PQ8N1L4 340 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 CYB561A3Q8NBI2 242 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 FAM46AQ96IP4 442 aaKnown RBP10.59□□□□□ -0.71
DDR1-239ENST00000452441 PIP5K1AQ99755 562 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 IL21RQ9HBE5 538 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 RWDD3Q9Y3V2 267 aa10.59□□□□□ -0.71
DDR1-239ENST00000452441 GKN3PP0CG01 181 aa10.58□□□□□ -0.72
DDR1-239ENST00000452441 JUNDP17535 347 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms