RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 AQP11Q8NBQ7 271 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 EEF1AKMT1Q8WVE0 214 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 LINGO1Q96FE5 620 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 FAM167AQ96KS9 214 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SLC6A18Q96N87 628 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 OR4K3Q96R72 315 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PANX1Q96RD7 426 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 YIPF4Q9BSR8 244 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TSSK6Q9BXA6 273 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SLC22A11Q9NSA0 550 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 IMP3Q9NV31 184 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 NUDT4Q9NZJ9 180 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 OR6C2Q9NZP2 312 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 MYEF2Q9P2K5 600 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 PPT2Q9UMR5 302 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 NEU3Q9UQ49 428 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 DERAQ9Y315 318 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SF3B6Q9Y3B4 125 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 ARL5AQ9Y689 179 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TMEM82A0PJX8 343 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 CLDN5O00501 218 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 KPNA3O00505 521 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 FPGTO14772 594 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SOD1P00441 154 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TFP02787 698 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 S100A8P05109 93 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SPP1P10451 314 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ZNF3P17036 446 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 NFYAP23511 347 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 GABRA5P31644 462 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 FEN1P39748 380 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 ETV5P41161 510 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 DGKEP52429 567 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 RAG2P55895 527 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 IL2P60568 153 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 MAXP61244 160 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 DSC2Q02487 901 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 HLXQ14774 488 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 SGCAQ16586 387 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 HECTD3Q5T447 861 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TMEM88Q6PEY1 159 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 HAGHLQ6PII5 290 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SIDT2Q8NBJ9 832 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 OR13C4Q8NGS5 318 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 HASPINQ8TF76 798 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 KCTD13Q8WZ19 329 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ZNF285Q96NJ3 590 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 TSSK3Q96PN8 268 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 UBL7Q96S82 380 aaPredicted RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 DMRTA2Q96SC8 542 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 CMSS1Q9BQ75 279 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 CACNG6Q9BXT2 260 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ULBP1Q9BZM6 244 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 CHIAQ9BZP6 476 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 ABCG4Q9H172 646 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 OR51M1Q9H341 326 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 PDGFCQ9NRA1 345 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 SEC14L3Q9UDX4 400 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 BTNL2Q9UIR0 455 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 MRTO4Q9UKD2 239 aaKnown RBP8.18□□□□□ -1.1
LSM5-208ENST00000450169 DLGAP4Q9Y2H0 992 aa8.18□□□□□ -1.1
LSM5-208ENST00000450169 OTOFQ9HC10 1997 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TTLL8A6PVC2 850 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 MAGEB17A8MXT2 336 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TLR5O60602 858 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 SNAPC5O75971 98 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 RAB36O95755 333 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 S100PP25815 95 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 OR1E2P47887 323 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 WNT4P56705 351 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 SELENOWP63302 87 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 GK2Q14410 553 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 DUOXA1Q1HG43 343 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 MICBQ29980 383 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ZRANB3Q5FWF4 1079 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 CD200R1LQ6Q8B3 271 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 UNC5DQ6UXZ4 953 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ZNF621Q6ZSS3 439 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NAXDQ8IW45 347 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 KRT78Q8N1N4 520 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 LRRC52Q8N7C0 313 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 GPR26Q8NDV2 337 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 RPLP0P6Q8NHW5 317 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 C2CD4CQ8TF44 421 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TRAPPC12Q8WVT3 735 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 ELP4Q96EB1 424 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 C12orf66Q96MD2 445 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 FDXACB1Q9BRP7 624 aaPredicted RBP8.17□□□□□ -1.1
LSM5-208ENST00000450169 CRB3Q9BUF7 120 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 SPATA5L1Q9BVQ7 753 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 TMEM39BQ9GZU3 492 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NT5MQ9NPB1 228 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 OSER1Q9NX31 292 aa8.17□□□□□ -1.1
LSM5-208ENST00000450169 NLGN3Q9NZ94 848 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms