RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 FOXL1Q12952 345 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SERTAD2Q14140 314 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SPARCL1Q14515 664 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SEMA3AQ14563 771 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 KBTBD12Q3ZCT8 623 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 AAGABQ6PD74 315 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 MFSD7Q6UXD7 560 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 STAC2Q6ZMT1 411 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF534Q76KX8 674 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 KIAA1328Q86T90 577 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 YRDCQ86U90 279 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 MPP5Q8N3R9 675 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF321PQ8N8H1 164 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF610Q8N9Z0 462 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 C7orf57Q8NEG2 295 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 PEX13Q92968 403 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 PKP2Q99959 881 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 PIMREGQ9BSJ6 248 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 NPLQ9BXD5 320 aaPredicted RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 TRIM2Q9C040 744 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 EIF2B3Q9NR50 452 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 WHRNQ9P202 907 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ZFP69BQ9UJL9 534 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 AMFRQ9UKV5 643 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
LINC01961-201ENST00000449954 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
LINC01961-201ENST00000449954 ALPK2Q86TB3 2170 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 A0A088AWK7 358 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 UQCRHLA0A096LP55 91 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 VWC2LB2RUY7 222 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 H7C417 338 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 OR1F1O43749 312 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF189O75820 626 aaPredicted RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 GAS8O95995 478 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 SMIM10L1P0DMW3 83 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CDH1P12830 882 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 COX7A2P14406 83 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF708P17019 499 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 TNNI3P19429 210 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF10P21506 573 aaPredicted RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 AHRP35869 848 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 KCNC1P48547 511 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 LHX2P50458 406 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ARFIP2P53365 341 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 GFRA1P56159 465 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 RAB8AP61006 207 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 STX4Q12846 297 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 RCN2Q14257 317 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 EFTUD2Q15029 972 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CYP1B1Q16678 543 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 EXOC3L2Q2M3D2 409 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 KLHL38Q2WGJ6 581 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 TIGD3Q6B0B8 471 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 SBSNQ6UWP8 590 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CHMP1BQ7LBR1 199 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 IFNEQ86WN2 208 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 C9orf40Q8IXQ3 194 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 TAGAPQ8N103 731 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 TRPV3Q8NET8 790 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ABHD11Q8NFV4 315 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 KBTBD8Q8NFY9 601 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 OR1J4Q8NGS1 313 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF721Q8TF20 911 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ASB11Q8WXH4 323 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 NEUROG1Q92886 237 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 HAUS1Q96CS2 278 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 DTNBP1Q96EV8 351 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 SMIM10Q96HG1 83 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ANP32EQ9BTT0 268 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 C12orf49Q9H741 205 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 METTL17Q9H7H0 456 aaPredicted RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CATSPERZQ9NTU4 200 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 TEX10Q9NXF1 929 aaPredicted RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 ARL15Q9NXU5 204 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CISD1Q9NZ45 108 aaKnown RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 CHMP5Q9NZZ3 219 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 LIMA1Q9UHB6 759 aaKnown RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 PCDHB10Q9UN67 800 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 GPR52Q9Y2T5 361 aa7.05□□□□□ -1.28
LINC01961-201ENST00000449954 BZW2Q9Y6E2 419 aaKnown RBP7.05□□□□□ -1.28
LINC01961-201ENST00000449954 SYCE3A1L190 88 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 GOLGA6L9A6NEM1 432 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 H7C0C1 242 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ZBTB14O43829 449 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CTNSO60931 367 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 IGKV3-11P04433 115 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 PSMB1P20618 241 aaKnown RBP7.04□□□□□ -1.28
LINC01961-201ENST00000449954 NR4A2P43354 598 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ATP5OP48047 213 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 HNRNPFP52597 415 aaKnown RBP7.04□□□□□ -1.28
LINC01961-201ENST00000449954 EFNA4P52798 201 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CDH11P55287 796 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 CLDN18P56856 261 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 ZNF844Q08AG5 666 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 KCNJ11Q14654 390 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 GUSBP1Q15486 140 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 TTLL9Q3SXZ7 439 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 TSTD2Q5T7W7 516 aa7.04□□□□□ -1.28
LINC01961-201ENST00000449954 C11orf71Q6IPW1 123 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms