RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 UMPSP11172 480 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 FCER1AP12319 257 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LAG3P18627 525 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OGNP20774 298 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 EFNA1P20827 205 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 COMTP21964 271 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 FDXRP22570 491 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPS3P23396 243 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 EEF1B2P24534 225 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 IGFBP5P24593 272 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRKCHP24723 683 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ITGA3P26006 1051 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAT2AP31153 395 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 HOXA9P31269 272 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARRB2P32121 409 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CBSP35520 551 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATP6V1E1P36543 226 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CRATP43155 626 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TGM4P49221 684 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CASP4P49662 377 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RGS6P49758 472 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 GATMP50440 423 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUDT2P50583 147 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANXA11P50995 505 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCR5P51681 352 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCR9P51686 369 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PTTG1IPP53801 180 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ATXN1P54253 815 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RRADP55042 308 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 WNT3P56703 355 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CARD18P57730 90 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC26A5P58743 744 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ISL1P61371 349 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 NCS1P62166 190 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RBX1P62877 108 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SKP1P63208 163 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TFAMQ00059 246 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 HGFACQ04756 655 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CSTF1Q05048 431 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRKCZQ05513 592 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TCF15Q12870 199 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF177Q13360 481 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPL49Q13405 166 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TDGQ13569 410 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SERTAD2Q14140 314 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARHGEF7Q14155 803 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SMCO1Q147U7 214 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBXN2BQ14CS0 331 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LARS2Q15031 903 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CHI3L2Q15782 390 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TOMM34Q15785 309 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TBR1Q16650 682 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 HADHQ16836 314 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 KCTD19Q17RG1 926 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SOWAHCQ53LP3 525 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SAMD4BQ5PRF9 694 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MLIPQ5VWP3 458 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 TTC23Q5W5X9 447 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ARHGAP17Q68EM7 881 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PLAG1Q6DJT9 500 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 FCRL6Q6DN72 434 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CLEC6AQ6EIG7 209 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC25A24Q6NUK1 477 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RPL13AP3Q6NVV1 102 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF529Q6P280 563 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 DEGS2Q6QHC5 323 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CASP12Q6UXS9 341 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 USP30Q70CQ3 517 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC16A13Q7RTY0 426 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPP1R32Q7Z5V6 425 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PTAR1Q7Z6K3 402 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPL52Q86TS9 123 aaKnown RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 PAQR7Q86WK9 346 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 RNF130Q86XS8 419 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CCDC117Q8IWD4 279 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC35F3Q8IY50 421 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM71AQ8IYT1 594 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAML2Q8IZL2 1156 aaPredicted RBP3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 CMTM4Q8IZR5 234 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR8H3Q8N146 312 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 LNX2Q8N448 690 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 DNAJC22Q8N4W6 341 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 MS4A15Q8N5U1 240 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 AMER2Q8N7J2 671 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 WDSUB1Q8N9V3 476 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 AGBL3Q8NEM8 1001 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 DNERQ8NFT8 737 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR8J2Q8NGG1 315 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR52N2Q8NGI0 321 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR4K15Q8NH41 348 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCAMP5Q8TAC9 235 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 BPIFB1Q8TDL5 484 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 THAP4Q8WY91 577 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 FCGR1BQ92637 280 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCAMP4Q969E2 229 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC38A4Q969I6 547 aa3.43□□□□□ -1.86
HMGB3P8-201ENST00000449709 ORAI1Q96D31 301 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms