RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ERVW-1Q9UQF0 538 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 A0A0G2JMP0 313 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 A0A0X1KG70 313 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SOX30O94993 753 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 DDOSTP39656 456 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SLC11A1P49279 550 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 TBPL1P62380 186 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RBBP4Q09028 425 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 VEZF1Q14119 521 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MANEALQ5VSG8 457 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CHST14Q8NCH0 376 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 OR4M2Q8NGB6 313 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RPLP0P6Q8NHW5 317 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 TM9SF4Q92544 642 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 OR4K3Q96R72 315 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 FERD3LQ96RJ6 166 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MCCC1Q96RQ3 725 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 XKR8Q9H6D3 395 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MED20Q9H944 212 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MKL2Q9ULH7 1088 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 TNFRSF10BO14763 440 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 LATO43561 262 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 HYAL3O43820 417 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RPL34P49207 117 aaKnown RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CAMK1Q14012 370 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ESPNLQ6ZVH7 1005 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 BHLHA9Q7RTU4 235 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 PTOV1Q86YD1 416 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CPOQ8IVL8 374 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SETD6Q8TBK2 473 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ZCCHC10Q8TBK6 192 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SMAP2Q8WU79 429 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ZBED6CLQ96FA7 236 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 FAIM2Q9BWQ8 316 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 THSD1Q9NS62 852 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RP1L1Q8IWN7 2480 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MCM3APO60318 1980 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 MBLAC1A4D2B0 266 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 FAM86C2PA6NEL3 165 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 POLR1CO15160 346 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 HRO43593 1189 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 PRR35P0CG20 571 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CD9P21926 228 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 GJA5P36382 358 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 GIPRP48546 466 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 PSMA6P60900 246 aaKnown RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RRAS2P62070 204 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 KCNJ10P78508 379 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ESCO2Q56NI9 601 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 TMCO2Q7Z6W1 182 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 KIF18BQ86Y91 864 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 METTL17Q9H7H0 456 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 POT1Q9NUX5 634 aa11.78□□□□□ -0.52
UBE3B-204ENST00000449510 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
UBE3B-204ENST00000449510 CCDC88CQ9P219 2028 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 COL2A1P02458 1487 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-204ENST00000449510 A0A1B0GVT2 93 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 POP4O95707 220 aaKnown RBP11.77□□□□□ -0.52
UBE3B-204ENST00000449510 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.52
UBE3B-204ENST00000449510 GNSP15586 552 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 GPX2P18283 190 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 SUOXP51687 545 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 PSPHP78330 225 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 PUDPQ08623 228 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 IRAK1BP1Q5VVH5 260 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 OLFML2AQ68BL7 652 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 TRIM46Q7Z4K8 759 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 SPERTQ8NA61 448 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 OR52N2Q8NGI0 321 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 SPRYD4Q8WW59 207 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-204ENST00000449510 UBE2E3Q969T4 207 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 TRIM43Q96BQ3 446 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-204ENST00000449510 AIF1LQ9BQI0 150 aa11.77□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF840PA6NDX5 716 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 H3BQ06 376 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 PRKYO43930 277 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 H2AFB2P0C5Z0 115 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF806P0C7X5 589 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 CD70P32970 193 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SOX18P35713 384 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 NUP62P37198 522 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 STAT5AP42229 794 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 GCGRP47871 477 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 CRYZQ08257 329 aaKnown RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 GPR17Q13304 367 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms