RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 RP1L1Q8IWN7 2480 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 NUP214P35658 2090 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 NCKAP5O14513 1909 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 A8MVJ9 347 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 J3QKU1 62 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 ZNF354AO60765 605 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 SNNO75324 88 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 NME6O75414 186 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 SLC25A12O75746 678 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 NEURL1O76050 574 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 OR6B1O95007 311 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 SNUPNO95149 360 aaKnown RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 BCKDHAP12694 445 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 CD46P15529 392 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 EFNA1P20827 205 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 NTSP30990 170 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 HLCSP50747 726 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 NCBP2P52298 156 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFC4-208ENST00000447345 PPP2R2AP63151 447 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 MGAT2Q10469 447 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 DUSP8Q13202 625 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 MAPKAPK3Q16644 382 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 TRMT12Q53H54 448 aaKnown RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 ZNF385BQ569K4 471 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 ZNF628Q5EBL2 1059 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 IL23RQ5VWK5 629 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 FAM180AQ6UWF9 173 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 IL20RBQ6UXL0 311 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 GALNTL5Q7Z4T8 443 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 FAM9CQ8IZT9 166 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 OR52R1Q8NGF1 315 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 OR8K3Q8NH51 312 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 RAB3IL1Q8TBN0 382 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 DYDC1Q8WWB3 177 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 CIDECQ96AQ7 238 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 MIB2Q96AX9 1013 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 PPCDCQ96CD2 204 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 OR10A5Q9H207 317 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 ACBD3Q9H3P7 528 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 THAP1Q9NVV9 213 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 HPF1Q9NWY4 346 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 EHD3Q9NZN3 535 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 DTX4Q9Y2E6 619 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 YARS2Q9Y2Z4 477 aaKnown RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
RFC4-208ENST00000447345 NINQ8N4C6 2090 aa11.04□□□□□ -0.64
RFC4-208ENST00000447345 C2orf92A0A1B0GVN3 265 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 PDPK1O15530 556 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 RASAL1O95294 804 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 CBX7O95931 251 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 TRHRP34981 398 aaPredicted RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 HPCAL1P37235 193 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 MC3RP41968 323 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 ASMTP46597 345 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 FOXK1P85037 733 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 FUT7Q11130 342 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 HSPB3Q12988 150 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 HLA-DQA1Q5Y7H0 255 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 TMEM64Q6YI46 380 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 MDGA2Q7Z553 956 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 ZNF227Q86WZ6 799 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 SAMD14Q8IZD0 417 aaPredicted RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 HORMAD2Q8N7B1 307 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 ZNF615Q8N8J6 731 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 TMEM178AQ8NBL3 297 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 C16orf52Q8NHV5 167 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 LRRC8CQ8TDW0 803 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 GRHL3Q8TE85 626 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 ZNF75CPQ92670 426 aaPredicted RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 TMEM125Q96AQ2 219 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 SCMH1Q96GD3 660 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 ITPAQ9BY32 194 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 REEP4Q9H6H4 257 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 AKTIPQ9H8T0 292 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 SH3BP4Q9P0V3 963 aa11.03□□□□□ -0.64
RFC4-208ENST00000447345 EIF3LQ9Y262 564 aaKnown RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 UBR5O95071 2799 aaPredicted RBP11.03□□□□□ -0.64
RFC4-208ENST00000447345 ESPL1Q14674 2120 aa11.02□□□□□ -0.64
RFC4-208ENST00000447345 GOLGA8QA0A0J9YX86 632 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 GOLGA8OA6NCC3 632 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 OR6C76A6NM76 312 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 MYO1GB0I1T2 1018 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 GOLGA8NF8WBI6 632 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 G3V3Y1 287 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 NME2P1O60361 137 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 VPS4BO75351 444 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 NADKO95544 446 aaPredicted RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 SP1P08047 785 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 G6PDP11413 515 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms