RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LAMA4Q16363 1823 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZMYM6O95789 1325 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 MROH5Q6ZUA9 1318 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 WDR19Q8NEZ3 1342 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 DOT1LQ8TEK3 1739 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 ARAP2Q8WZ64 1704 aa3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.67□□□□□ -1.82
HMGB3P6-201ENST00000444896 COL16A1Q07092 1604 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CARMIL3Q8ND23 1372 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 TRBV5-4A0A0C4DH59 114 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CPLX1O14810 134 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CTAGE5O15320 804 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 GPAA1O43292 621 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF749O43361 778 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 B4GAT1O43505 415 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 JAK2O60674 1132 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 KINO60870 393 aaKnown RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 POP4O95707 220 aaKnown RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 EPOP01588 193 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 NUDT17P0C025 328 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SHC1P29353 583 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CTNNB1P35222 781 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CASP3P42574 277 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCR4P51679 360 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CRYBA2P53672 197 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 KIAA1024LP59773 190 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 TIMM10P62072 90 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC152Q4G0S7 254 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CAPN13Q6MZZ7 669 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 NEPROQ6NW34 567 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SASS6Q6UVJ0 657 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 STOX1Q6ZVD7 989 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 KCNMB4Q86W47 210 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 NAT8LQ8N9F0 302 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 TRPV3Q8NET8 790 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SPATA18Q8TC71 538 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 PDLIM5Q96HC4 596 aaKnown RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 ALKBH3Q96Q83 286 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SSX3Q99909 188 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 UBAC1Q9BSL1 405 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 LRRC2Q9BYS8 371 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 TUBB1Q9H4B7 451 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CLSTN2Q9H4D0 955 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 GNB4Q9HAV0 340 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 MAGEF1Q9HAY2 307 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 FAM212BQ9NTI7 297 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF319Q9P2F9 582 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 TRMT112Q9UI30 125 aaKnown RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 STX8Q9UNK0 236 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 SH3GLB1Q9Y371 365 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 NRAPQ86VF7 1730 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 UMODL1Q5DID0 1318 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 CICQ96RK0 1608 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 LAMB2P55268 1798 aa3.66□□□□□ -1.82
HMGB3P6-201ENST00000444896 NUP98P52948 1817 aa3.65□□□□□ -1.82
HMGB3P6-201ENST00000444896 KLF18A0A0U1RQI7 1052 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 A0A1W2PRV1 198 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 TMEM129A0AVI4 362 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 GOLGA6L19H0YKK7 550 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 CHUKO15111 745 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 IDH1O75874 414 aaKnown RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ADCY5O95622 1261 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 CPNE6O95741 557 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 PCP11498 1178 aaKnown RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 B4GALT1P15291 398 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 GLRA1P23415 457 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ADORA1P30542 326 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 FCGR2BP31994 310 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 FCGR2CP31995 323 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 FHITP49789 147 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ATP4BP51164 291 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 NDUFV3P56181 108 aaKnown RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 GABPAQ06546 454 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 RIGQ13278 110 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 RAPSNQ13702 412 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 STXBP2Q15833 593 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 STX1AQ16623 288 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCDC91Q7Z6B0 441 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 PHC2Q8IXK0 858 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF444Q8N0Y2 327 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ELMOD1Q8N336 334 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 SFRP1Q8N474 314 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 C10orf53Q8N6V4 93 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 CLEC1AQ8NC01 280 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 C17orf47Q8NEP4 570 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 PRCCQ92733 491 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ANKRD9Q96BM1 317 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ULK4Q96C45 1275 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 C8orf76Q96K31 380 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 GUCD1Q96NT3 240 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 SOSTQ9BQB4 213 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF577Q9BSK1 485 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 CHCHD5Q9BSY4 110 aa3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 NUSAP1Q9BXS6 441 aaKnown RBP3.65□□□□□ -1.83
HMGB3P6-201ENST00000444896 KCNK13Q9HB14 408 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms