RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CHTF18Q8WVB6 975 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 TP53INP1Q96A56 240 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 JSRP1Q96MG2 331 aaPredicted RBP18.5■□□□□ 0.55
LRCH3-208ENST00000443727 ACPTQ9BZG2 426 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 TP63Q9H3D4 680 aaPredicted RBP18.5■□□□□ 0.55
LRCH3-208ENST00000443727 COQ3Q9NZJ6 369 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 BCAP29Q9UHQ4 241 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 MCM8Q9UJA3 840 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 CES1P1Q9UKY3 287 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 EMCNQ9ULC0 261 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 GRID1Q9ULK0 1009 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 TIMM22Q9Y584 194 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 ITPR2Q14571 2701 aa18.5■□□□□ 0.55
LRCH3-208ENST00000443727 G3V2L1 256 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 COPEO14579 308 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 ADAM10O14672 748 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 PCDH7O60245 1069 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 CLDN14O95500 239 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 TNFRSF8P28908 595 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 TMED10P49755 219 aaKnown RBP18.49■□□□□ 0.55
LRCH3-208ENST00000443727 HTR6P50406 440 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 HMGCS1Q01581 520 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 BTKQ06187 659 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 FOXO1Q12778 655 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 SLC10A1Q14973 349 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 CCDC153Q494R4 210 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 SPIN4Q56A73 249 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 SPDYAQ5MJ70 313 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 TMEM211Q6ICI0 200 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 ZNF615Q8N8J6 731 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 EPS8L3Q8TE67 593 aaKnown RBP18.49■□□□□ 0.55
LRCH3-208ENST00000443727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.49■□□□□ 0.55
LRCH3-208ENST00000443727 DIO2Q92813 273 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 KCNA7Q96RP8 456 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 SMC6Q96SB8 1091 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 DMRTA2Q96SC8 542 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 DOHHQ9BU89 302 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 GSTO2Q9H4Y5 243 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 SH2D2AQ9NP31 389 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 UTS2RQ9UKP6 389 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 CFL2Q9Y281 166 aa18.49■□□□□ 0.55
LRCH3-208ENST00000443727 CACNA1DQ01668 2161 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 LRATO95237 230 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 PROCP04070 461 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 ATP1B1P05026 303 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 COX6B1P14854 86 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 NAGLUP54802 743 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 NAA20P61599 178 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 RPS6KA2Q15349 733 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 NTRK2Q16620 822 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 HYAL4Q2M3T9 481 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 SCIMPQ6UWF3 145 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 TDRPQ86YL5 185 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 LRRC25Q8N386 305 aaPredicted RBP18.48■□□□□ 0.55
LRCH3-208ENST00000443727 ZNF441Q8N8Z8 693 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 ADCY4Q8NFM4 1077 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 CA5BP1Q8WTZ4 195 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 SDCCAG3Q96C92 435 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 ZFP64Q9NPA5 681 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 B4GALT7Q9UBV7 327 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 ACAD8Q9UKU7 415 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 DLGAP4Q9Y2H0 992 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 NPFFR2Q9Y5X5 522 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 LIPGQ9Y5X9 500 aa18.48■□□□□ 0.55
LRCH3-208ENST00000443727 CHCHD2Q9Y6H1 151 aaPredicted RBP18.48■□□□□ 0.55
LRCH3-208ENST00000443727 OR14I1A6ND48 311 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 BCKDKO14874 412 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 PLIN3O60664 434 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 CDH16O75309 829 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 IGHG3P01860 377 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 SNRPB2P08579 225 aaKnown RBP18.47■□□□□ 0.55
LRCH3-208ENST00000443727 IL3P08700 152 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 CELA3AP09093 270 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 DRD2P14416 443 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 KRT4P19013 534 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 CRHR1P34998 444 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 MAN2A2P49641 1150 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 FBXW4P57775 412 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 RPP38P78345 283 aaKnown RBP18.47■□□□□ 0.55
LRCH3-208ENST00000443727 MAP4K2Q12851 820 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 EXOSC7Q15024 291 aaKnown RBP18.47■□□□□ 0.55
LRCH3-208ENST00000443727 IMPG1Q17R60 797 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 PRICKLE4Q2TBC4 344 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 GXYLT1Q4G148 440 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 FAM180BQ6P0A1 224 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 FAM111BQ6SJ93 734 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 TRILQ7L0X0 811 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 OR5M9Q8NGP3 310 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 RDH11Q8TC12 318 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 APIPQ96GX9 242 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 GIMAP4Q9NUV9 329 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 MAT2BQ9NZL9 334 aa18.47■□□□□ 0.55
LRCH3-208ENST00000443727 TLDC2A0PJX2 215 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 H3BQF6 201 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 CPA3P15088 417 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 S1PR1P21453 382 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 GPX3P22352 226 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 TIA1P31483 386 aaKnown RBP eCLIP18.46■□□□□ 0.55
LRCH3-208ENST00000443727 HEPACAMQ14CZ8 416 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 NNATQ16517 81 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms