RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 TGFB1P01137 390 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 CRYGSP22914 178 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 LOXP28300 417 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 ELK3P41970 407 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 SSR2P43308 183 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 MASP1P48740 699 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 HNRNPH2P55795 449 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 EEF1A1P68104 462 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 FUT7Q11130 342 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 GAB1Q13480 694 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 CAPRIN1Q14444 709 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 EEF1A1P5Q5VTE0 462 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 SULT1C3Q6IMI6 304 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 C20orf204Q6ZNR8 217 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 YRDCQ86U90 279 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 PDPRQ8NCN5 879 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 C17orf47Q8NEP4 570 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 CMTM7Q96FZ5 175 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 KRT12Q99456 494 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
HMGN1-208ENST00000443046 ACBD3Q9H3P7 528 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
HMGN1-208ENST00000443046 SAP18O00422 153 aaKnown RBP13.08□□□□□ -0.32
HMGN1-208ENST00000443046 MSTNO14793 375 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 CDH16O75309 829 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SH3BGRLO75368 114 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 IVDP26440 423 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SERPINB1P30740 379 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SSTR4P31391 388 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 PTGDSP41222 190 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 FNTAP49354 379 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 TMED10P49755 219 aaKnown RBP13.08□□□□□ -0.32
HMGN1-208ENST00000443046 ARFIP1P53367 373 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 DIO3P55073 304 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 GFRA1P56159 465 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 IRF8Q02556 426 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 FAM27E3Q08E93 113 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 CBLBQ13191 982 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
HMGN1-208ENST00000443046 PLXDC2Q6UX71 529 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 ZNF615Q8N8J6 731 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 SNX31Q8N9S9 440 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 OR7G3Q8NG95 312 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 UBE2E3Q969T4 207 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 OR2B2Q9GZK3 357 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 OR51B5Q9H339 312 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 CXorf21Q9HAI6 301 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 ASB4Q9Y574 426 aa13.08□□□□□ -0.32
HMGN1-208ENST00000443046 A0A1W2PNV4 684 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 A0A1W2PR48 441 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 PLPP1O14494 284 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 GNB5O14775 395 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 NAGAP17050 411 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 CHMP24386 653 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 ABCD3P28288 659 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 CDC25BP30305 580 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 PTH2RP49190 550 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
HMGN1-208ENST00000443046 SETDB1Q15047 1291 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 TOMM20Q15388 145 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 OR4D1Q15615 310 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 HP1BP3Q5SSJ5 553 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-208ENST00000443046 MED27Q6P2C8 311 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 GPSM1Q86YR5 675 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 GCNT2Q8N0V5 402 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 HGDQ93099 445 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 RGMAQ96B86 450 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 PIK3IP1Q96FE7 263 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 PBKQ96KB5 322 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 UBTD1Q9HAC8 227 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 ZNF226Q9NYT6 803 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 MOCS1Q9NZB8 636 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 TSC22D4Q9Y3Q8 395 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 ABCA1O95477 2261 aa13.07□□□□□ -0.32
HMGN1-208ENST00000443046 A0A0A6YYD5 115 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 A0A1W2PS29 197 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 H0Y3Z8 333 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SNPHO15079 494 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 HCRTR2O43614 444 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 OR10H2O60403 315 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SOX30O94993 753 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 CT62P0C5K7 136 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 CD1DP15813 335 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 BUD31P41223 144 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-208ENST00000443046 LHX2P50458 406 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms