RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CENPLQ8N0S6 344 aaPredicted RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 LINC00528Q8N1L1 170 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 PTGR2Q8N8N7 351 aaPredicted RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 ACBD4Q8NC06 268 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 NEIL3Q8TAT5 605 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 WDR20Q8TBZ3 569 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 DIO2Q92813 273 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 ERP27Q96DN0 273 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 CCDC126Q96EE4 140 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 FMO2Q99518 471 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 ERVK-6Q9BXR3 956 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 MRPL46Q9H2W6 279 aaKnown RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 DEPPQ9NTK1 212 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 GIMAP4Q9NUV9 329 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 TUBA8Q9NY65 449 aaPredicted RBP7.16□□□□□ -1.26
CD44-211ENST00000442151 ERVK-19Q9WJR5 959 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 RNF11Q9Y3C5 154 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 NPFFR2Q9Y5X5 522 aa7.16□□□□□ -1.26
CD44-211ENST00000442151 A0A1W2PR48 441 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 TRAPPC6AO75865 159 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 IL2RAP01589 272 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 GLI4P10075 376 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 CCL3P10147 92 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 DRD2P14416 443 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 GDF1P27539 372 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 MSX1P28360 303 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 KRT20P35900 424 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 DNASE1L1P49184 302 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 NR0B1P51843 470 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 RIPPLY3P57055 190 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SLC37A1P57057 533 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SLC7A5Q01650 507 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 FUT7Q11130 342 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 MAP4K2Q12851 820 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SNTA1Q13424 505 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 EBPQ15125 230 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 RPS6KA2Q15349 733 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SLC30A6Q6NXT4 461 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 C3P1Q6ZMU1 363 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 CDH24Q86UP0 819 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SLC22A9Q8IVM8 553 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 LRRC25Q8N386 305 aaPredicted RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 METTL4Q8N3J2 472 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 AMER2Q8N7J2 671 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 GBP7Q8N8V2 638 aaPredicted RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 OR5M9Q8NGP3 310 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SPPL2AQ8TCT8 520 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SELENOMQ8WWX9 145 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 IFT81Q8WYA0 676 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 ISL2Q96A47 359 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 TMCO6Q96DC7 493 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 PHF21BQ96EK2 531 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 JSRP1Q96MG2 331 aaPredicted RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 LRRC1Q9BTT6 524 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 ANGPTL4Q9BY76 406 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 IQCGQ9H095 443 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 OR10A5Q9H207 317 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 CXorf21Q9HAI6 301 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 SH2D2AQ9NP31 389 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 PNPLA3Q9NST1 481 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 ZDHHC18Q9NUE0 388 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 NINJ2Q9NZG7 142 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 ITGB1BP2Q9UKP3 347 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 WBP11Q9Y2W2 641 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 PCDHA9Q9Y5H5 950 aa7.15□□□□□ -1.26
CD44-211ENST00000442151 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
CD44-211ENST00000442151 MYOCOSA0A1B0GUC4 107 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 FAM90A27PA6NNH2 459 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 POC1B-GALNT4F8VUJ3 575 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 SYT5O00445 386 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 WISP2O76076 250 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 TOXO94900 526 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 NADKO95544 446 aaPredicted RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 ESRRBO95718 433 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 AIFM1O95831 613 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 EPPINO95925 133 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ACTL6AO96019 429 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 KLK1P06870 262 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 GSTA1P08263 222 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 RHOXF2BP0C7M4 288 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 DDX5P17844 614 aaKnown RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 PIGAP37287 484 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 FOXO1Q12778 655 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 RCAN2Q14206 197 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 HEPACAMQ14CZ8 416 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 RASA2Q15283 850 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 TEX35Q5T0J7 233 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ADNP2Q6IQ32 1131 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 TMEM81Q6P7N7 255 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 TIFABQ6ZNK6 161 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 C16orf47Q6ZP98 133 aaPredicted RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 TRMT10CQ7L0Y3 403 aaKnown RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 LACC1Q8IV20 430 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 C9orf40Q8IXQ3 194 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 IFT20Q8IY31 132 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 CEP112Q8N8E3 955 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ZNF321PQ8N8H1 164 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ACMSDQ8TDX5 336 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms