RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DIO2Q92813 273 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 DOHHQ9BU89 302 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 CNIH4Q9P003 139 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF225Q9UK10 706 aa18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 PHF3Q92576 2039 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-204ENST00000440118 PCDH7O60245 1069 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 CT62P0C5K7 136 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 MAN2A2P49641 1150 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 PKNOX1P55347 436 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 RPP38P78345 283 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 SPIN4Q56A73 249 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 CFAP157Q5JU67 520 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 FAM219BQ5XKK7 198 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 GBP7Q8N8V2 638 aaPredicted RBP18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 OR7G1Q8NGA0 311 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 PAQR8Q8TEZ7 354 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 L3HYPDHQ96EM0 354 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 DMRTA2Q96SC8 542 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 EPB41L4BQ9H329 900 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 PPCSQ9HAB8 311 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 MID1IP1Q9NPA3 183 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 PLSCR2Q9NRY7 297 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 GIMAP4Q9NUV9 329 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 CFL2Q9Y281 166 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 LIPGQ9Y5X9 500 aa18.29■□□□□ 0.52
SHROOM1-204ENST00000440118 NCKAP5O14513 1909 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 OR14I1A6ND48 311 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 FIGNL2A6NMB9 653 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 BCKDKO14874 412 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 CLPSP04118 112 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 CCT5P48643 541 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 MASP1P48740 699 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 TRA2BP62995 288 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 FUT7Q11130 342 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 SLC10A1Q14973 349 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 NNATQ16517 81 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 IMPG1Q17R60 797 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 TBCELQ5QJ74 424 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF585AQ6P3V2 769 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 TMEM64Q6YI46 380 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 MCEMP1Q8IX19 187 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 MMP21Q8N119 569 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 LRRC25Q8N386 305 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 LIX1Q8N485 282 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 EIF1ADQ8N9N8 165 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 OR5M9Q8NGP3 310 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 CDC26Q8NHZ8 85 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 TP53INP1Q96A56 240 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF597Q96LX8 424 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 ACPTQ9BZG2 426 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 ZFP64Q9NPA5 681 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 SENP1Q9P0U3 644 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 MCM8Q9UJA3 840 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 UTS2RQ9UKP6 389 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 ACAD8Q9UKU7 415 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 FREM3P0C091 2139 aa18.28■□□□□ 0.52
SHROOM1-204ENST00000440118 A0A1W2PPM1 405 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 SHBGP04278 402 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 CELA3AP09093 270 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 HTR6P50406 440 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 FBXW4P57775 412 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 HMGCS1Q01581 520 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 BTKQ06187 659 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 FOXO1Q12778 655 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 NTRK2Q16620 822 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 CCDC153Q494R4 210 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 SPDYAQ5MJ70 313 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 LYPD8Q6UX82 237 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 ZYG11AQ6WRX3 759 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 TRILQ7L0X0 811 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 GDF7Q7Z4P5 450 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 PRR22Q8IZ63 422 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 MZB1Q8WU39 189 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 RND1Q92730 232 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 SARAFQ96BY9 339 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 TM4SF18Q96CE8 201 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 KCNA7Q96RP8 456 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 EBPLQ9BY08 206 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF703Q9H7S9 590 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 PNPLA3Q9NST1 481 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 TIMM22Q9Y584 194 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 NPFFR2Q9Y5X5 522 aa18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 CHCHD2Q9Y6H1 151 aaPredicted RBP18.27■□□□□ 0.52
SHROOM1-204ENST00000440118 TRGV5A0A0B4J1U4 118 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 COPEO14579 308 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ADAM10O14672 748 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 IGHG3P01860 377 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ATP1B1P05026 303 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 IL3P08700 152 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 CHN1P15882 459 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 GDF1P27539 372 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 TIA1P31483 386 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 PTGER4P35408 488 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 NAA20P61599 178 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 EXOSC7Q15024 291 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 HYAL4Q2M3T9 481 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 WLSQ5T9L3 541 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 TMEM198Q66K66 360 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 FAM180BQ6P0A1 224 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms