RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 WSB2Q9NYS7 404 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 CLCA2Q9UQC9 943 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 RTTNQ86VV8 2226 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 A0A0B4J203 849 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 A0A1W2PRB8 838 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HMX3A6NHT5 357 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 H0YC42 278 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 LGALS8O00214 317 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR1F1O43749 312 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 CSO75390 466 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PAK4O96013 591 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 CLTBP09497 229 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PTPN2P17706 415 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SEC13P55735 322 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRKCDQ05655 676 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 TBCEQ15813 527 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 KLHL12Q53G59 568 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 AKIRIN2Q53H80 203 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 GET4Q7L5D6 327 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HCAR2Q8TDS4 363 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 LRR1Q96L50 414 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ABCG4Q9H172 646 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ANKRA2Q9H9E1 313 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SEMA3GQ9NS98 782 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PTGFRNQ9P2B2 879 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 KCNK6Q9Y257 313 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HCN4Q9Y3Q4 1203 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR1A2Q9Y585 309 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 IGHA2P01877 340 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 CD3GP09693 182 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRKAR1AP10644 381 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ACP5P13686 325 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ITGA2P17301 1181 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 IMPA1P29218 277 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HNMTP50135 292 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 LARS2Q15031 903 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF783Q6ZMS7 281 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PARS2Q7L3T8 475 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 RRM2BQ7LG56 351 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 VWA5B2Q8N398 1253 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 BTN2A2Q8WVV5 523 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZFPM2Q8WW38 1151 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 USP7Q93009 1102 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRMT2BQ96GJ1 504 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SPNS1Q9H2V7 528 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 RHBGQ9H310 441 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HHATLQ9HCP6 504 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZFR2Q9UPR6 939 aaKnown RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 EYSQ5T1H1 3165 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SCN2AQ99250 2005 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 PPM1DO15297 605 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 SCO2O43819 266 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRKRAO75569 313 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 CTSLP07711 333 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 MRPL3P09001 348 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 JUNDP17535 347 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 XKP51811 444 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 OLR1P78380 273 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 CRYZQ08257 329 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM9CQ8IZT9 166 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM46DQ8NEK8 389 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 SUSD6Q92537 303 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 QRFPRQ96P65 431 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 OPALINQ96PE5 141 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FCRL4Q96PJ5 515 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 DOHHQ9BU89 302 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 SEC16AO15027 2179 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZC3H12DA2A288 527 aaKnown RBP9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 GRXCR1A8MXD5 290 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 CLCNKAP51800 687 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 AP1S2P56377 157 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 CDK6Q00534 326 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC5A12Q1EHB4 618 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF385BQ569K4 471 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 GCNT6Q5T4J0 391 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FCRLBQ6BAA4 426 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 TUBA3EQ6PEY2 450 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF613Q6PF04 617 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 Q6ZNB5 142 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 CCDC190Q86UF4 302 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 COMMD7Q86VX2 200 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 LACC1Q8IV20 430 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 LRRC17Q8N6Y2 441 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR4F15Q8NGB8 312 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FCGR1BQ92637 280 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 FERD3LQ96RJ6 166 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 NLNQ9BYT8 704 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 DEC1Q9P2X7 70 aa9.42□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC31A1O15431 190 aa9.41□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC28A2O43868 658 aa9.41□□□□□ -0.9
CDC42SE1-202ENST00000439374 RGS11O94810 467 aa9.41□□□□□ -0.9
CDC42SE1-202ENST00000439374 IFNW1P05000 195 aa9.41□□□□□ -0.9
CDC42SE1-202ENST00000439374 HBQ1P09105 142 aa9.41□□□□□ -0.9
CDC42SE1-202ENST00000439374 PPM1AP35813 382 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms