RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 ACAD11Q709F0 780 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 PTRH1Q86Y79 214 aaKnown RBP15.7■□□□□ 0.1
TARDBP-203ENST00000439080 RIMKLAQ8IXN7 391 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 ARMC10Q8N2F6 343 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 RBMXL3Q8N7X1 1067 aaKnown RBP15.7■□□□□ 0.1
TARDBP-203ENST00000439080 OR7G1Q8NGA0 311 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 NUDT8Q8WV74 236 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 KAT2AQ92830 837 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 CTHRC1Q96CG8 243 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 THOC1Q96FV9 657 aaKnown RBP15.7■□□□□ 0.1
TARDBP-203ENST00000439080 MARK4Q96L34 752 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 GAL3ST4Q96RP7 486 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 EBF4Q9BQW3 602 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 RNF32Q9H0A6 362 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 OR10A5Q9H207 317 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 CCDC134Q9H6E4 229 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 LIN28AQ9H9Z2 209 aaKnown RBP15.7■□□□□ 0.1
TARDBP-203ENST00000439080 PLA2G3Q9NZ20 509 aa15.7■□□□□ 0.1
TARDBP-203ENST00000439080 DYTNA2CJ06 578 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 TMEM200CA6NKL6 621 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 OR6C76A6NM76 312 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 FCHO1O14526 889 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ITGA10O75578 1167 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 WDPCPO95876 746 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 CBX7O95931 251 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 S1PR1P21453 382 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 MDH1P40925 334 aaKnown RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 IDH3AP50213 366 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ST13P50502 369 aaKnown RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 NME5P56597 212 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 HSPB3Q12988 150 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 DUSP8Q13202 625 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 LSM12Q3MHD2 195 aaKnown RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 TRMT12Q53H54 448 aaKnown RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 CPTPQ5TA50 214 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 TMEM198Q66K66 360 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 TMEM107Q6UX40 140 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 C16orf47Q6ZP98 133 aaPredicted RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 SLC29A4Q7RTT9 530 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ZADH2Q8N4Q0 377 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ZNF615Q8N8J6 731 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 SIMC1Q8NDZ2 872 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 OR52R1Q8NGF1 315 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 CEP70Q8NHQ1 597 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ZFP28Q8NHY6 868 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 NUBPLQ8TB37 319 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ZBED6CLQ96FA7 236 aaPredicted RBP15.69■□□□□ 0.1
TARDBP-203ENST00000439080 MFRPQ9BY79 579 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 DPY30Q9C005 99 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 WWTR1Q9GZV5 400 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 NPHS2Q9NP85 383 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 TCF7L2Q9NQB0 619 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ATAD3AQ9NVI7 634 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 STMN3Q9NZ72 180 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 MYOTQ9UBF9 498 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 ZNF639Q9UID6 485 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 MAPRE3Q9UPY8 281 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 SPTA1P02549 2419 aa15.69■□□□□ 0.1
TARDBP-203ENST00000439080 WWP2O00308 870 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 ANKRD28O15084 1053 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 PRAMEF2O60811 474 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 SLITRK5O94991 958 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 LAMP1P11279 417 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 IDO1P14902 403 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 EFNA1P20827 205 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-203ENST00000439080 MC3RP41968 323 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 FRKP42685 505 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-203ENST00000439080 KLRB1Q12918 225 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 NADK2Q4G0N4 442 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 ZNF551Q7Z340 670 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-203ENST00000439080 CAMKMTQ7Z624 323 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 OR7G2Q8NG99 324 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 OR5L2Q8NGL0 311 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 C16orf52Q8NHV5 167 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 ERP27Q96DN0 273 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 PRPF18Q99633 342 aaKnown RBP15.68■□□□□ 0.1
TARDBP-203ENST00000439080 ANKRA2Q9H9E1 313 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 FGFR1OP2Q9NVK5 253 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 ANKRD10Q9NXR5 420 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 BCAP29Q9UHQ4 241 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 DTX4Q9Y2E6 619 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 GPR45Q9Y5Y3 372 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 CNTRLQ7Z7A1 2325 aa15.68■□□□□ 0.1
TARDBP-203ENST00000439080 OR5H15A6NDH6 313 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 EIF4E1BA6NMX2 242 aaKnown RBP15.67■□□□□ 0.1
TARDBP-203ENST00000439080 E9PBE3 544 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 C1QL1O75973 258 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 OR2J2O76002 312 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 VIMP08670 466 aaKnown RBP15.67■□□□□ 0.1
TARDBP-203ENST00000439080 GPC1P35052 558 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 CASRP41180 1078 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 CLNS1AP54105 237 aaKnown RBP15.67■□□□□ 0.1
TARDBP-203ENST00000439080 TUBA3CQ13748 450 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 COLEC12Q5KU26 742 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 SLC6A19Q695T7 634 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 TUBA3EQ6PEY2 450 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 TEX19Q8NA77 164 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 RFWD2Q8NHY2 731 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 RASL10BQ96S79 203 aa15.67■□□□□ 0.1
TARDBP-203ENST00000439080 SIKE1Q9BRV8 207 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms