RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ZNF582Q96NG8 517 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 QRSL1Q9H0R6 528 aaKnown RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 BRD9Q9H8M2 597 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CNIH4Q9P003 139 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 MYOFQ9NZM1 2061 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CLDN11O75508 207 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 VNN2O95498 520 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 SLC16A8O95907 504 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 STATHP02808 62 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 RAF1P04049 648 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HOXB6P17509 224 aaKnown RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CTRB1P17538 263 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 POU3F2P20265 443 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 GIFP27352 417 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 SPAM1P38567 509 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 MRPL58Q14197 206 aaKnown RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 PGBD2Q6P3X8 592 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 TPGS1Q6ZTW0 290 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 KIF18BQ86Y91 864 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HORMAD2Q8N7B1 307 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 OR5D16Q8NGK9 328 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 BBS10Q8TAM1 723 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HSD17B8Q92506 261 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 KLK6Q92876 244 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HTATIP2Q9BUP3 242 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 RNF32Q9H0A6 362 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 SPNS1Q9H2V7 528 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ENAMQ9NRM1 1142 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ZNF282Q9UDV7 671 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 FAM183AA6NL82 134 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 FZD6O60353 706 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 STC2O76061 302 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CPEP16870 476 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 RHCEP18577 417 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 ATP6V1E1P36543 226 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CPT1AP50416 773 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TIGD3Q6B0B8 471 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 MACC1Q6ZN28 852 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TAS1R1Q7RTX1 841 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 COMMD6Q7Z4G1 85 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 DUSP18Q8NEJ0 188 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 OR8J1Q8NGP2 316 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 UFD1Q92890 307 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 NEIL2Q969S2 332 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 ARSGQ96EG1 525 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 SLC12A9Q9BXP2 914 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 KLHL1Q9NR64 748 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 ARHGEF33A8MVX0 844 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 SLC43A1O75387 559 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 EIF4EP06730 217 aaKnown RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 NTRK2Q16620 822 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 PLK5Q496M5 336 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TMEM81Q6P7N7 255 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 GPR135Q8IZ08 494 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 FAM9CQ8IZT9 166 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 BRI3BPQ8WY22 251 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 UCN3Q969E3 161 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TMEM19Q96HH6 336 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 RBP7Q96R05 134 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 SLC22A12Q96S37 553 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 RDH14Q9HBH5 336 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 GSTK1Q9Y2Q3 226 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 A0A1B0GVM2 712 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TCRBV16S1A1N1A0A5B0 115 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 MPZL2O60487 215 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 MMP11P24347 488 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 NSG1P42857 185 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 RNF144AP50876 292 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CLCNKAP51800 687 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 PPP3R1P63098 170 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CLLU1OSQ5K130 101 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 PODNL1Q6PEZ8 512 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CRTC1Q6UUV9 634 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 ARSKQ6UWY0 536 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 GDPGP1Q6ZNW5 385 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TMEM173Q86WV6 379 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-204ENST00000438964 LIX1LQ8IVB5 337 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 TOR1AIP2Q8NFQ8 470 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 OR52N2Q8NGI0 321 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 AP3S1Q92572 193 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 THSD1Q9NS62 852 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 FLVCR2Q9UPI3 526 aa12.67□□□□□ -0.38
ACTN1-204ENST00000438964 SF3B6Q9Y3B4 125 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms