RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SHFQ7M4L6 423 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NRARPQ7Z6K4 114 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 KLBQ86Z14 1044 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 VRK3Q8IV63 474 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 NUP43Q8NFH3 380 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 RIPOR3Q96MK2 946 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC22A12Q96S37 553 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 PDCD10Q9BUL8 212 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 MKKSQ9NPJ1 570 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SLC35C2Q9NQQ7 365 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 POLR1DQ9Y2S0 133 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
CSDE1-205ENST00000438362 I3L521 148 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GNB5O14775 395 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 AXIN1O15169 862 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PRODHO43272 600 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 SLC25A12O75746 678 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 RASGRP1O95267 797 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 B3GALT4O96024 378 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 C6P13671 934 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF8P17098 575 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ACADLP28330 430 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NDUFS1P28331 727 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 IMPA1P29218 277 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PDHA2P29803 388 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GUCA1AP43080 201 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ELAVL3Q14576 367 aaKnown RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PYCR3Q53H96 274 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 XAF1Q6GPH4 301 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 C8orf82Q6P1X6 216 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.35□□□□□ -1.397e-9■■■□□ 18.5
CSDE1-205ENST00000438362 GRASPQ7Z6J2 395 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 KLHDC8BQ8IXV7 354 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ANKK1Q8NFD2 765 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GRHL3Q8TE85 626 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PIGKQ92643 395 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF354BQ96LW1 612 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 OR5M11Q96RB7 305 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NIPSNAP1Q9BPW8 284 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GABARAPL1Q9H0R8 117 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CARS2Q9HA77 564 aaKnown RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TAS2R16Q9NYV7 291 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF639Q9UID6 485 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 MAFFQ9ULX9 164 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM5Q9Y2B1 443 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 COL11A2P13942 1736 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 SIPA1L1O43166 1804 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 C2orf92A0A1B0GVN3 265 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 HMX3A6NHT5 357 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TGM5O43548 720 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GNRH1P01148 92 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GASTP01350 101 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 RHOP08100 348 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NDUFV2P19404 249 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 HLA-FP30511 346 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ACTR1BP42025 376 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 STARP49675 285 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TAS2R38P59533 333 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ACTR1AP61163 376 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ILF3Q12906 894 aaKnown RBP eCLIP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 MLLT11Q13015 90 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF791Q3KP31 576 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 SPATC1Q76KD6 591 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NOXA1Q86UR1 476 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NLGN4XQ8N0W4 816 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF563Q8TA94 476 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ACOT12Q8WYK0 555 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GSDMCQ9BYG8 508 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CDH10Q9Y6N8 788 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GON4LQ3T8J9 2241 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 A0A0G2JPF8 293 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 C1orf226A1L170 272 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF879B4DU55 563 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 HNRNPCL3B7ZW38 293 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 FLRT2O43155 660 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 EEF1E1O43324 174 aaKnown RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 LYRM1O43325 122 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 C1orf105O95561 183 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 IL1AP01583 271 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ASGR2P07307 311 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 HNRNPCL4P0DMR1 293 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ITPKBP27987 946 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 GRK6P43250 576 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PRLHRP49683 370 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PFN3P60673 137 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 PON3Q15166 354 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CTF1Q16619 201 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM35AQ53FP2 167 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 NDUFAF5Q5TEU4 345 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 OR4C11Q6IEV9 310 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CNIH2Q6PI25 160 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM107Q6UX40 140 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 RSPO2Q6UXX9 243 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-205ENST00000438362 LIPIQ6XZB0 460 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 RASSF6Q6ZTQ3 369 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM173Q86WV6 379 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms