RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 GFERP55789 205 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 HNRNPKP61978 463 aaKnown RBP eCLIP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 NKAIN2Q5VXU1 208 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 LRRC25Q8N386 305 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 OR7G2Q8NG99 324 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 OR4K14Q8NGD5 310 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 OR56A1Q8NGH5 318 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 EPYCQ99645 322 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 THSD1Q9NS62 852 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 TMEM247A6NEH6 219 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 GALR3O60755 368 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 RDH16O75452 317 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 CHRM4P08173 479 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 PRR5P85299 388 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 EPS8Q12929 822 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 SRSF5Q13243 272 aaKnown RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 MEP1AQ16819 746 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 EXOC3L2Q2M3D2 409 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 THAP5Q7Z6K1 395 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 COMTD1Q86VU5 262 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 RBM45Q8IUH3 476 aaKnown RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 PIK3C3Q8NEB9 887 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 OR9A4Q8NGU2 314 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 VANGL1Q8TAA9 524 aaPredicted RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 TGM7Q96PF1 710 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 QRSL1Q9H0R6 528 aaKnown RBP15.67■□□□□ 0.1
USHBP1-203ENST00000431146 KRT84Q9NSB2 600 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 SEC14L3Q9UDX4 400 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 KLHL3Q9UH77 587 aa15.67■□□□□ 0.1
USHBP1-203ENST00000431146 WDR87Q6ZQQ6 2873 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 LMO7DNF2Z398 122 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 ADAMDEC1O15204 470 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 BCAT2O15382 392 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 PDGFBP01127 241 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 ALDH4A1P30038 563 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 XCR1P46094 333 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 C21orf59P57076 290 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 CTU2Q2VPK5 515 aaKnown RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 KCTD21Q4G0X4 260 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 BHLHB9Q6PI77 547 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 SLC36A4Q6YBV0 504 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 MCATQ8IVS2 390 aaKnown RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 OR4D11Q8NGI4 311 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 APOBEC4Q8WW27 367 aaKnown RBP15.66■□□□□ 0.1
USHBP1-203ENST00000431146 NRBF2Q96F24 287 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 OR7D2Q96RA2 312 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF347Q96SE7 839 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 RBCK1Q9BYM8 510 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 FAM192AQ9GZU8 254 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 C3orf14Q9HBI5 128 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 RLIMQ9NVW2 624 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 AASSQ9UDR5 926 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 CLCA2Q9UQC9 943 aa15.66■□□□□ 0.1
USHBP1-203ENST00000431146 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 A0A1B0GVT2 93 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 BCKDKO14874 412 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 FGF17O60258 216 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 MED26O95402 600 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 IFNW1P05000 195 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PABPC4LP0CB38 370 aaKnown RBP15.65■□□□□ 0.1
USHBP1-203ENST00000431146 MYF5P13349 255 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PPP2R1BP30154 601 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 BNIP3Q12983 259 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 RAPSNQ13702 412 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 GPAT3Q53EU6 434 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 KLHL35Q6PF15 583 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 LACC1Q8IV20 430 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 CA13Q8N1Q1 262 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 GALNT15Q8N3T1 639 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 TMIGD2Q96BF3 282 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 GIMAP5Q96F15 307 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 ZNF607Q96SK3 696 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 FEVQ99581 238 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 ADNPQ9H2P0 1102 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 LYRM4Q9HD34 91 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PAPOLBQ9NRJ5 636 aaKnown RBP15.65■□□□□ 0.1
USHBP1-203ENST00000431146 DDX18Q9NVP1 670 aaKnown RBP15.65■□□□□ 0.1
USHBP1-203ENST00000431146 ENPP4Q9Y6X5 453 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 A0A0C4DFX4 3053 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 CYR61O00622 381 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PCDH17O14917 1159 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 DPM1O60762 260 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 SEMA7AO75326 666 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PIAS2O75928 621 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 DNAJB5O75953 348 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 CPMP14384 443 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 ITGA2P17301 1181 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 CLK3P49761 638 aaKnown RBP15.65■□□□□ 0.1
USHBP1-203ENST00000431146 NR1H2P55055 460 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 CD47Q08722 323 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 RFX4Q33E94 735 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 FAHD1Q6P587 224 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 OR9Q2Q8NGE9 314 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 OR4C15Q8NGM1 316 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 GIPC3Q8TF64 312 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 DNASE2BQ8WZ79 361 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PROX1Q92786 737 aa15.65■□□□□ 0.1
USHBP1-203ENST00000431146 PIP5K1AQ99755 562 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms