RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ST13P50502 369 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 CRISP3P54108 245 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SRP54P61011 504 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ACTR1AP61163 376 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ILKQ13418 452 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 DGCR6Q14129 220 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 PRRT3Q5FWE3 981 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 FCRL6Q6DN72 434 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 BHLHB9Q6PI77 547 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 KIAA1324Q6UXG2 1013 aaKnown RBP13.14□□□□□ -0.31
HOXC4-202ENST00000430889 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 OLIG3Q7RTU3 272 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ASPGQ86U10 573 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 MYDGFQ969H8 173 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 BORCS5Q969J3 196 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SLC22A18Q96BI1 424 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 FCRL4Q96PJ5 515 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SRMSQ9H3Y6 488 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 SELENONQ9NZV5 590 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 ENTPD4Q9Y227 616 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
HOXC4-202ENST00000430889 A0A0G2JPF8 293 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 SH3D21A4FU49 640 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM247A6NEH6 219 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 HNRNPCL2B2RXH8 293 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 HNRNPCL3B7ZW38 293 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 M0R129 80 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 P2RX6O15547 441 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 CTSVO60911 334 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ZBTB11O95625 1053 aaPredicted RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ADRA2AP08913 450 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ZNF888P0CJ79 500 aaPredicted RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 HNRNPCL4P0DMR1 293 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 NR2F6P10588 404 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ALPPL2P10696 532 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ACADMP11310 421 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 OSMP13725 252 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 POU2F1P14859 743 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 UGT2B7P16662 529 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 PSMB9P28065 219 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 PPP2R1BP30154 601 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ANXA11P50995 505 aaKnown RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 LIMK1P53667 647 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TGM3Q08188 693 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 LASP1Q14847 261 aaKnown RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ANKDD1AQ495B1 522 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM201Q5SNT2 666 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 DCST1Q5T197 706 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 SLX4IPQ5VYV7 408 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 C12orf73Q69YU5 71 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 CD300LDQ6UXZ3 194 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 DGLUCYQ7Z3D6 616 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TRIM73Q86UV7 250 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 KRT73Q86Y46 540 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 RPLP0P6Q8NHW5 317 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 FNDC8Q8TC99 324 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 DYNC2LI1Q8TCX1 351 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 SLC38A4Q969I6 547 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 C16orf58Q96GQ5 468 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 UCK2Q9BZX2 261 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
HOXC4-202ENST00000430889 ANKMY1Q9P2S6 941 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 TRPC4Q9UBN4 977 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 MMP17Q9ULZ9 603 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
HOXC4-202ENST00000430889 LRRC72A6NJI9 287 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 M0R3H8 397 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SYT5O00445 386 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TOR1BO14657 336 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CASC3O15234 703 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ZW10O43264 779 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SH3BP5O60239 455 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 MPZL2O60487 215 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 RASGRP1O95267 797 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 IGLV3-19P01714 112 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 C8orf89P0DMQ9 161 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CNR2P34972 360 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SOX18P35713 384 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 LIPAP38571 399 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 FEN1P39748 380 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 NUDT6P53370 316 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SMIM11AP58511 58 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CDC42P60953 191 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SNRPGP62308 76 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 BTN3A2P78410 334 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TNFRSF17Q02223 184 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ALDH6A1Q02252 535 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 RELAQ04206 551 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms