RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DCAF10Q5QP82 559 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 DNAJC14Q6Y2X3 702 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 RNF111Q6ZNA4 994 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 ZNF551Q7Z340 670 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 SNX32Q86XE0 403 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CLECL1Q8IZS7 167 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 ADCY4Q8NFM4 1077 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 OR56A1Q8NGH5 318 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 OR1N1Q8NGS0 311 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 DNAJB8Q8NHS0 232 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 RP9Q8TA86 221 aaKnown RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 PSMA8Q8TAA3 256 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 M1APQ8TC57 530 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 PTPMT1Q8WUK0 201 aaPredicted RBP10.26□□□□□ -0.77
CHD4-202ENST00000430771 NCLNQ969V3 563 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 VPS33AQ96AX1 596 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CTHRC1Q96CG8 243 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CMTM5Q96DZ9 223 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 MS4A4EQ96PG1 132 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 C3orf14Q9HBI5 128 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 ZNF160Q9HCG1 818 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 MMP25Q9NPA2 562 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 PRODH2Q9UF12 536 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 SNX8Q9Y5X2 465 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 FRYQ5TBA9 3013 aa10.26□□□□□ -0.77
CHD4-202ENST00000430771 CHD8Q9HCK8 2581 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 TRBV11-1A0A0K0K1C0 115 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 RNF103-CHMP3A0A140T963 221 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 ARGFXA6NJG6 315 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 K7ENP7 123 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 EMC8O43402 210 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 SCN2BO60939 215 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 KCNH1O95259 989 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 DDAH2O95865 285 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 IGKV3-11P04433 115 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 CT62P0C5K7 136 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 COX4I1P13073 169 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 PTGER1P34995 402 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 TRPC1P48995 793 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 HBA1P69905 142 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 PHC1P78364 1004 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 VAC14Q08AM6 782 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 ZNF155Q12901 538 aaPredicted RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 AIMP2Q13155 320 aaKnown RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 STX5Q13190 355 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 ATP1A1-AS1Q5TC04 95 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 REP15Q6BDI9 236 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 INO80CQ6PI98 192 aaPredicted RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 DGAT2L6Q6ZPD8 337 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 SLC29A4Q7RTT9 530 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 DHDDSQ86SQ9 333 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 KBTBD2Q8IY47 623 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 OR2L13Q8N349 312 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 PCYOX1LQ8NBM8 494 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 OR7G2Q8NG99 324 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 OR52R1Q8NGF1 315 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 OR8K3Q8NH51 312 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 GOT1L1Q8NHS2 421 aaPredicted RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 ZNF721Q8TF20 911 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 NUDT8Q8WV74 236 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 KAT2AQ92830 837 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 ELP4Q96EB1 424 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 IMMP1LQ96LU5 166 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 MESP1Q9BRJ9 268 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 SEMA4CQ9C0C4 833 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 OR10A5Q9H207 317 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 ATP13A2Q9NQ11 1180 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 SIRT3Q9NTG7 399 aaPredicted RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 ZCCHC3Q9NUD5 404 aaKnown RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 BCAP29Q9UHQ4 241 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 C19orf53Q9UNZ5 99 aaPredicted RBP10.25□□□□□ -0.77
CHD4-202ENST00000430771 PCSK5Q92824 1860 aa10.25□□□□□ -0.77
CHD4-202ENST00000430771 A0A096LPI6 279 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 TTC36A6NLP5 189 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 MRASO14807 208 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 ERN1O75460 977 aaKnown RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 CBX7O95931 251 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 SERPINA7P05543 415 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 KRT16P08779 473 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 UQCRC2P22695 453 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 ITGA3P26006 1051 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 SSTR4P31391 388 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 CHI3L1P36222 383 aaPredicted RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 PRIM2P49643 509 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 ANXA11P50995 505 aaKnown RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 PSPHP78330 225 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 MGAT2Q10469 447 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 TP53BP2Q13625 1128 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 NFYCQ13952 458 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 EXOSC7Q15024 291 aaKnown RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 ZNHIT3Q15649 155 aaPredicted RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 TRMT5Q32P41 509 aaKnown RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 HLA-DQA1Q5Y7H0 255 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 JMJD6Q6NYC1 403 aaPredicted RBP10.24□□□□□ -0.77
CHD4-202ENST00000430771 SLC2A7Q6PXP3 512 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 FAM111BQ6SJ93 734 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 TRPM8Q7Z2W7 1104 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 TREML1Q86YW5 311 aa10.24□□□□□ -0.77
CHD4-202ENST00000430771 DPP10Q8N608 796 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms