RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CTAGE15A4D2H0 777 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ERICH4A6NGS2 130 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MSGN1A6NI15 193 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 YJEFN3A6XGL0 299 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 H0YL77 283 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF195O14628 629 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MAGEB3O15480 346 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 EXTL3O43909 919 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ANXA9O76027 345 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 UFL1O94874 794 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 AP2A2O94973 939 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ANGPTL1O95841 491 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CHRNA1P02708 482 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 UQCRC2P22695 453 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CASQ1P31415 396 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CYLC1P35663 651 aaPredicted RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MAP2K2P36507 400 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ACADSBP45954 432 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 RGS4P49798 205 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 XGP55808 180 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 RPL27P61353 136 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CDR2Q01850 454 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 SPIBQ01892 262 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ITPK1Q13572 414 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 EXOSC2Q13868 293 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 TEAD2Q15562 447 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM52BQ4KMG9 183 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 LINC01620Q4KN68 170 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CFAP157Q5JU67 520 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ARHGEF16Q5VV41 709 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 HIST2H2AA3Q6FI13 130 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 FIP1L1Q6UN15 594 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 Q6ZRG5 221 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 Q6ZVQ6 151 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CTAGE6Q86UF2 777 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MARVELD2Q8N4S9 558 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 GANCQ8TET4 914 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ATP8B4Q8TF62 1192 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 TMEM37Q8WXS4 190 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CASP10Q92851 521 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 RPL3LQ92901 407 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ZNF486Q96H40 463 aaPredicted RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 LURAP1Q96LR2 239 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 OVOL2Q9BRP0 275 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 NDUFAF3Q9BU61 184 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MAGT1Q9H0U3 335 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 NCOR1P1Q9H4R4 102 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 WDR76Q9H967 626 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 C3orf14Q9HBI5 128 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 S100A14Q9HCY8 104 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 FARSBQ9NSD9 589 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 STARD5Q9NSY2 213 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 DDX18Q9NVP1 670 aaKnown RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 AIPL1Q9NZN9 384 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 EPHA6Q9UF33 1036 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 TEKT2Q9UIF3 430 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MAN1B1Q9UKM7 699 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 ELF5Q9UKW6 265 aaPredicted RBP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 CLEC4AQ9UMR7 237 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 NIP7Q9Y221 180 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P9-201ENST00000429856 SLC6A5Q9Y345 797 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 MAB21L2Q9Y586 359 aa2.53□□□□□ -2
HMGB1P9-201ENST00000429856 IGHV4-4A0A075B6R2 117 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 NR5A2O00482 541 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 IMPA2O14732 288 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 CHEK1O14757 476 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 KLF11O14901 512 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 CASQ2O14958 399 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 EPHB6O15197 1021 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 DCXO43602 365 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 EFNA2O43921 213 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 TBX19O60806 448 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 TRMUO75648 421 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 SURF6O75683 361 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 IDH1O75874 414 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 KRT33AO76009 404 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 NDUFA7O95182 113 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 IL1BP01584 269 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 VTNP04004 478 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 LYNP07948 512 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 GSTA2P09210 222 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 HIST1H2AGP0C0S8 130 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 SLC2A2P11168 524 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 CPN1P15169 458 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 RPL35AP18077 110 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 HNF1AP20823 631 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 CCNCP24863 283 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 RFC2P35250 354 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 ID1P41134 155 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 TNNT2P45379 298 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 LEPRP48357 1165 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 ACADVLP49748 655 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 FHITP49789 147 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 SGSHP51688 502 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 NUCB2P80303 420 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 TNFRSF17Q02223 184 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 P2RY14Q15391 338 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 FCN2Q15485 313 aa2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 IMMTQ16891 758 aaKnown RBP2.52□□□□□ -2.01
HMGB1P9-201ENST00000429856 KIF26BQ2KJY2 2108 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms