RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 FIG4Q92562 907 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 LCORQ96JN0 433 aaPredicted RBP12.94□□□□□ -0.34
PDE6D-203ENST00000428104 F2RL3Q96RI0 385 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 TAS2R10Q9NYW0 307 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 PACSIN2Q9UNF0 486 aaPredicted RBP12.94□□□□□ -0.34
PDE6D-203ENST00000428104 KCNE2Q9Y6J6 123 aa12.94□□□□□ -0.34
PDE6D-203ENST00000428104 AP3B1O00203 1094 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 RTCAO00442 366 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 PPP3CBP16298 524 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 ZNF708P17019 499 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 ITGA2P17301 1181 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 TMED10P49755 219 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 PGGT1BP53609 377 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 SNX1Q13596 522 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 SETDB1Q15047 1291 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 KCTD19Q17RG1 926 aaPredicted RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 PGGHGQ32M88 737 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 STAC2Q6ZMT1 411 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 SLCO4C1Q6ZQN7 724 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 PPM1NQ8N819 430 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 ZNF669Q96BR6 464 aaPredicted RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 C12orf65Q9H3J6 166 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 ACTR8Q9H981 624 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 SNX15Q9NRS6 342 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
PDE6D-203ENST00000428104 PROCRQ9UNN8 238 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 RNF115Q9Y4L5 304 aa12.93□□□□□ -0.34
PDE6D-203ENST00000428104 C2orf92A0A1B0GVN3 265 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 TCRBV7S3A2A0A539 114 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 OR6C76A6NM76 312 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 CD8AP01732 235 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 C1GALT1C1LP0DN25 315 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 ALOX15P16050 662 aaPredicted RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 CPN2P22792 545 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 ATP5A1P25705 553 aaKnown RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 NUDT6P53370 316 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 CDKN2DP55273 166 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 RPP38P78345 283 aaKnown RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 CYP1B1Q16678 543 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 FREM1Q5H8C1 2179 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 CLEC2AQ6UVW9 174 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 UBE3DQ7Z6J8 389 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 UBQLNLQ8IYU4 475 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 ACOT4Q8N9L9 421 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 LRRC57Q8N9N7 239 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 ZMYND19Q96E35 227 aaPredicted RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 SFXN2Q96NB2 322 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 MANSC1Q9H8J5 431 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
PDE6D-203ENST00000428104 KCNS2Q9ULS6 477 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 NOTCH1P46531 2555 aa12.92□□□□□ -0.34
PDE6D-203ENST00000428104 PRKDCP78527 4128 aaKnown RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 A0A0G2JK05 382 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 GRID2IPA4D2P6 1211 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ANKDD1BA6NHY2 528 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TCF21O43680 179 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ABCB7O75027 752 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ICOSLGO75144 302 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TPM1P09493 284 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 SSTR4P31391 388 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 PTGDSP41222 190 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 KCNC1P48547 511 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TERF1P54274 439 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 RPS13P62277 151 aaKnown RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ZNF844Q08AG5 666 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 SQLEQ14534 574 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 SPRED3Q2MJR0 410 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 WDSUB1Q8N9V3 476 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 BBOF1Q8ND07 529 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 C11orf24Q96F05 449 aaPredicted RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 KCNC2Q96PR1 638 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TRAF4Q9BUZ4 470 aaPredicted RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 OSBPL11Q9BXB4 747 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TSGA10Q9BZW7 698 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 ACTR6Q9GZN1 396 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 RNF122Q9H9V4 155 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 FBXO5Q9UKT4 447 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 EXO1Q9UQ84 846 aaKnown RBP12.91□□□□□ -0.34
PDE6D-203ENST00000428104 SPACA6W5XKT8 324 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 NBEAL2Q6ZNJ1 2754 aa12.91□□□□□ -0.34
PDE6D-203ENST00000428104 DYSFO75923 2080 aa12.9□□□□□ -0.34
PDE6D-203ENST00000428104 ELOA3DA6NLF2 546 aaPredicted RBP12.9□□□□□ -0.34
PDE6D-203ENST00000428104 H0YC42 278 aa12.9□□□□□ -0.34
PDE6D-203ENST00000428104 CDH16O75309 829 aa12.9□□□□□ -0.34
PDE6D-203ENST00000428104 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.34
PDE6D-203ENST00000428104 CBR3O75828 277 aa12.9□□□□□ -0.34
PDE6D-203ENST00000428104 FTCDO95954 541 aa12.9□□□□□ -0.34
PDE6D-203ENST00000428104 TPM3P06753 285 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms