RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 OR10A5Q9H207 317 aa17.66■□□□□ 0.42
COL9A2-204ENST00000427563 ZDHHC11Q9H8X9 412 aa17.66■□□□□ 0.42
COL9A2-204ENST00000427563 MKS1Q9NXB0 559 aa17.66■□□□□ 0.42
COL9A2-204ENST00000427563 TUBA8Q9NY65 449 aaPredicted RBP17.66■□□□□ 0.42
COL9A2-204ENST00000427563 DLGAP4Q9Y2H0 992 aa17.66■□□□□ 0.42
COL9A2-204ENST00000427563 CHCHD2Q9Y6H1 151 aaPredicted RBP17.66■□□□□ 0.42
COL9A2-204ENST00000427563 CACNA1DQ01668 2161 aa17.66■□□□□ 0.42
COL9A2-204ENST00000427563 FREM3P0C091 2139 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 CDC40O60508 579 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL9A2-204ENST00000427563 PDE9AO76083 593 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 LRATO95237 230 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 ATP1B1P05026 303 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 CELA3AP09093 270 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 TIA1P31483 386 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL9A2-204ENST00000427563 PPIAP62937 165 aaKnown RBP17.65■□□□□ 0.42
COL9A2-204ENST00000427563 BTKQ06187 659 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 MAP4K2Q12851 820 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 GALNT18Q6P9A2 607 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 C3P1Q6ZMU1 363 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 TMEM251Q8N6I4 163 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 BANPQ8N9N5 519 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 ADCY4Q8NFM4 1077 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 RDH11Q8TC12 318 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 SLC22A8Q8TCC7 542 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 C16orf78Q8WTQ4 265 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 CTHRC1Q96CG8 243 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 KLHL29Q96CT2 875 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 FAM173AQ9BQD7 235 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 SACM1LQ9NTJ5 587 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.65■□□□□ 0.421e-6■■■■□ 19.8
COL9A2-204ENST00000427563 NMRK1Q9NWW6 199 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 SIRT5Q9NXA8 310 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 LGALS13Q9UHV8 139 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 CNOT11Q9UKZ1 510 aaKnown RBP17.65■□□□□ 0.42
COL9A2-204ENST00000427563 MEMO1Q9Y316 297 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 CCL27Q9Y4X3 112 aa17.65■□□□□ 0.42
COL9A2-204ENST00000427563 C2orf92A0A1B0GVN3 265 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 GUCY1B2O75343 617 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 CBX7O95931 251 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 CREB1P16220 341 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 ABOP16442 354 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 GPX3P22352 226 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 GRNP28799 593 aaKnown RBP17.64■□□□□ 0.41
COL9A2-204ENST00000427563 ALDH9A1P49189 494 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 EXOSC7Q15024 291 aaKnown RBP17.64■□□□□ 0.41
COL9A2-204ENST00000427563 NTRK2Q16620 822 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 TRMT12Q53H54 448 aaKnown RBP17.64■□□□□ 0.41
COL9A2-204ENST00000427563 EMC4Q5J8M3 183 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 PRAMEF20Q5VT98 475 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 LIPMQ5VYY2 423 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 FAM47EQ6ZV65 393 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 DMRTA2Q96SC8 542 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 GATA5Q9BWX5 397 aaPredicted RBP17.64■□□□□ 0.41
COL9A2-204ENST00000427563 ANKRA2Q9H9E1 313 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 SLC17A7Q9P2U7 560 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 EXO1Q9UQ84 846 aaKnown RBP17.64■□□□□ 0.41
COL9A2-204ENST00000427563 PLLPQ9Y342 182 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 PTGDR2Q9Y5Y4 395 aa17.64■□□□□ 0.41
COL9A2-204ENST00000427563 CACNA1CQ13936 2221 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 LRRC3CA6NJW4 275 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 H2AFXP16104 143 aaPredicted RBP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 PCSK2P16519 638 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 CSNK2A2P19784 350 aaPredicted RBP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 MAGEA5P43359 124 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 PLGLB1Q02325 96 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 ACSM2AQ08AH3 577 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 HYAL4Q2M3T9 481 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 SPIN4Q56A73 249 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 ACSM2BQ68CK6 577 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 CLEC6AQ6EIG7 209 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 TRIM46Q7Z4K8 759 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 MRGPRGQ86SM5 289 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 PRR22Q8IZ63 422 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 VWA5B2Q8N398 1253 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 FBXW8Q8N3Y1 598 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 RIBC1Q8N443 379 aaPredicted RBP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 MARVELD2Q8N4S9 558 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 CCDC63Q8NA47 563 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 OR7G1Q8NGA0 311 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 FAM57AQ8TBR7 257 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 TP53INP1Q96A56 240 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 NTNG2Q96CW9 530 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 APOPT1Q96IL0 206 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 FAIM2Q9BWQ8 316 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 BRINP2Q9C0B6 783 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 NXF5Q9H1B4 397 aaKnown RBP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 IL1RL2Q9HB29 575 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 SUCOQ9UBS9 1254 aaKnown RBP17.63■□□□□ 0.41
COL9A2-204ENST00000427563 UTS2RQ9UKP6 389 aa17.63■□□□□ 0.41
COL9A2-204ENST00000427563 GOLGA6L10A6NI86 522 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 NME6O75414 186 aaPredicted RBP17.62■□□□□ 0.41
COL9A2-204ENST00000427563 IGHG3P01860 377 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 P04436 131 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 RFPL3SP0C7P2 107 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 PTGS2P35354 604 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 FBXW4P57775 412 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 MRPS35P82673 323 aaKnown RBP17.62■□□□□ 0.41
COL9A2-204ENST00000427563 ZNF628Q5EBL2 1059 aa17.62■□□□□ 0.41
COL9A2-204ENST00000427563 SLC22A10Q63ZE4 541 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms