RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 OR8J2Q8NGG1 315 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 WDR20Q8TBZ3 569 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 CXorf40AQ8TE69 158 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 FAM46AQ96IP4 442 aaKnown RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 MED20Q9H944 212 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 NLKQ9UBE8 527 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 DPP7Q9UHL4 492 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 FAM240BA0A1B0GVZ2 78 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 IGLON5A6NGN9 336 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 GFYI3L273 518 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 KMOO15229 486 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 FCARP24071 287 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 PNLIPRP1P54315 467 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 MPEG1Q2M385 716 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 FAM78AQ5JUQ0 283 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 CCNJQ5T5M9 372 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 GRHL2Q6ISB3 625 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 AMZ2Q86W34 360 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 GALNT12Q8IXK2 581 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SLC7A13Q8TCU3 470 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SUSD6Q92537 303 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 TRMT61AQ96FX7 289 aaKnown RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 GAL3ST1Q99999 423 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 CPEB1Q9BZB8 566 aaKnown RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 SLAMF7Q9NQ25 335 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 ZNF624Q9P2J8 865 aaPredicted RBP12.67□□□□□ -0.38
USP42-203ENST00000426246 ANKMY1Q9P2S6 941 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 SLC23A2Q9UGH3 650 aa12.67□□□□□ -0.38
USP42-203ENST00000426246 HRO43593 1189 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NR2F6P10588 404 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 SOX18P35713 384 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 DHCR24Q15392 516 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NNATQ16517 81 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 OXR1Q8N573 874 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 SCAIQ8N9R8 606 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 OR52N2Q8NGI0 321 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 OR51G2Q8NGK0 314 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 ZFP3Q96NJ6 502 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 ASB16Q96NS5 453 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 LGR4Q9BXB1 951 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 RPRD1BQ9NQG5 326 aaKnown RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 PLXNA2O75051 1894 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TMEM221A6NGB7 291 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NDUFS4O43181 175 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 FURINP09958 794 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 CCNYL3P0C7X3 344 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 PPIBP23284 216 aaKnown RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 CASP3P42574 277 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 CSNK2BP67870 215 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 CSTF1Q05048 431 aaKnown RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 IDNKQ5T6J7 187 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 FAM92BQ6ZTR7 304 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 ETFBKMTQ8IXQ9 262 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 MCCC1Q96RQ3 725 aaPredicted RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 ADAP2Q9NPF8 381 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 AHSPQ9NZD4 102 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 MAT2BQ9NZL9 334 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TAAR2Q9P1P5 351 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 BTNL2Q9UIR0 455 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 EXO1Q9UQ84 846 aaKnown RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 MAGEB4O15481 346 aaPredicted RBP12.66□□□□□ -0.38
USP42-203ENST00000426246 PRKYO43930 277 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 GYPBP06028 91 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NOS3P29474 1203 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 ZNF91Q05481 1191 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 DOC2BQ14184 412 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 PUM1Q14671 1186 aaKnown RBP eCLIP12.66□□□□□ -0.38
USP42-203ENST00000426246 ZNF805Q5CZA5 627 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NXPE4Q6UWF7 544 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 NLRP8Q86W28 1048 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 PPP1R14BQ96C90 147 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 SLC6A17Q9H1V8 727 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 CFL2Q9Y281 166 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 PCDHGA2Q9Y5H1 932 aa12.66□□□□□ -0.38
USP42-203ENST00000426246 TRIM64A6NGJ6 449 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 PSMD9O00233 223 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 GPR37L1O60883 481 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 REM1O75628 298 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 CD79BP40259 229 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 RORCP51449 518 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 PLAG1Q6DJT9 500 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 ACSM5Q6NUN0 579 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 PODNL1Q6PEZ8 512 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 PLET1Q6UQ28 207 aa12.65□□□□□ -0.38
USP42-203ENST00000426246 GET4Q7L5D6 327 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms