RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 GATA5Q9BWX5 397 aaPredicted RBP16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 IL1RL2Q9HB29 575 aa16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 MKS1Q9NXB0 559 aa16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 TUBA8Q9NY65 449 aaPredicted RBP16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 CNOT11Q9UKZ1 510 aaKnown RBP16.89■□□□□ 0.29
SMARCAL1-205ENST00000425815 CDC40O60508 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CBX7O95931 251 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 P04436 131 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 TIA1P31483 386 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 PTGS2P35354 604 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 ALDH9A1P49189 494 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CASP6P55212 293 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 NAA20P61599 178 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 PLGLB1Q02325 96 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 ACSM2AQ08AH3 577 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 PCLAFQ15004 111 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 EXOSC7Q15024 291 aaKnown RBP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CDSNQ15517 529 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 NTRK2Q16620 822 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 TRMT12Q53H54 448 aaKnown RBP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 SPIN4Q56A73 249 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 ACSM2BQ68CK6 577 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 C3P1Q6ZMU1 363 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 RGS9BPQ6ZS82 235 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 FAM47EQ6ZV65 393 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 MRGPRGQ86SM5 289 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CCDC116Q8IYX3 515 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 KLHL29Q96CT2 875 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 EBPLQ9BY08 206 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 UTS2RQ9UKP6 389 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 PSME2Q9UL46 239 aa16.88■□□□□ 0.29
SMARCAL1-205ENST00000425815 MAST4O15021 2626 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 CCDC151A5D8V7 595 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 GOLGA6L10A6NI86 522 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 CELA3AP09093 270 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 RFPL3SP0C7P2 107 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 DRD2P14416 443 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 CREB1P16220 341 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 ABOP16442 354 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 GPX3P22352 226 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 MAGEA5P43359 124 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 CFAP157Q5JU67 520 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 EMBQ6PCB8 327 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 GK5Q6ZS86 529 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 VWA5B2Q8N398 1253 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 FAM57AQ8TBR7 257 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 NTNG2Q96CW9 530 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 DMRTA2Q96SC8 542 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 BRINP2Q9C0B6 783 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 SLC17A7Q9P2U7 560 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 SUCOQ9UBS9 1254 aaKnown RBP16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 EXO1Q9UQ84 846 aaKnown RBP16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 NPFFR2Q9Y5X5 522 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 LIPGQ9Y5X9 500 aa16.87■□□□□ 0.29
SMARCAL1-205ENST00000425815 UNC79Q9P2D8 2635 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 GNG14A0A1W2PPG7 69 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 H3BQF6 201 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 LRATO95237 230 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 IGHG3P01860 377 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ANXA4P09525 319 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ESRRAP11474 423 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 PCSK2P16519 638 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 GRNP28799 593 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ALDH3A1P30838 453 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 EMDP50402 254 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 FBXW4P57775 412 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ART3Q13508 389 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 KIAA0040Q15053 153 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 CEBPEQ15744 281 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ZNF628Q5EBL2 1059 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 EMC4Q5J8M3 183 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 PRAMEF20Q5VT98 475 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 SP5Q6BEB4 398 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 CLEC6AQ6EIG7 209 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 MTFR2Q6P444 385 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 SLC22A16Q86VW1 577 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 DND1Q8IYX4 353 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 TAGAPQ8N103 731 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 FBXW8Q8N3Y1 598 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ZNF808Q8N4W9 903 aaPredicted RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 C17orf47Q8NEP4 570 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 OR52R1Q8NGF1 315 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 OR5M3Q8NGP4 307 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 APOPT1Q96IL0 206 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 PARD6BQ9BYG5 372 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 NXF5Q9H1B4 397 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ANKRA2Q9H9E1 313 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 RYDENQ9NUL5 291 aaKnown RBP16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 PTGDR2Q9Y5Y4 395 aa16.86■□□□□ 0.29
SMARCAL1-205ENST00000425815 ZNF780BQ9Y6R6 833 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms