RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 CBWD1Q9BRT8 395 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 RAB17Q9H0T7 212 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 WDR13Q9H1Z4 485 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 HOMER3Q9NSC5 361 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 KLHL8Q9P2G9 620 aaPredicted RBP4.06□□□□□ -1.76
LINC00400-201ENST00000425609 CLIP2Q9UDT6 1046 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 AURKCQ9UQB9 309 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 CSNK1G3Q9Y6M4 447 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 RREB1Q92766 1687 aa4.06□□□□□ -1.76
LINC00400-201ENST00000425609 SMG6Q86US8 1419 aaKnown RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 KIF24Q5T7B8 1368 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 COL18A1P39060 1754 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 IGHV3-20A0A0C4DH32 117 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 TCP10L2B9ZVM9 353 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 F8WDY8 70 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 G3V2L1 256 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 ARPC1BO15143 372 aaKnown RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 GRID2O43424 1007 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 MAGEC1O60732 1142 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 AKR7A3O95154 331 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 GUCA1CO95843 209 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 RPLP0P05388 317 aaKnown RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 PROS1P07225 676 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 APRTP07741 180 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 SP1P08047 785 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 PTPN4P29074 926 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 MMP12P39900 470 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 TKTL1P51854 596 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 SLC26A5P58743 744 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 FUT7Q11130 342 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 RIGQ13278 110 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 PDIA5Q14554 519 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 RFTN2Q52LD8 501 aaPredicted RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 HIST2H2AA3Q6FI13 130 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 RTL6Q6ICC9 239 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 CDC42EP5Q6NZY7 148 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 TMEM26Q6ZUK4 368 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 Q71RC1 249 aaPredicted RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 YRDCQ86U90 279 aaKnown RBP4.05□□□□□ -1.76
LINC00400-201ENST00000425609 KLHDC8BQ8IXV7 354 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 FAM71CQ8NEG0 241 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 OR9Q2Q8NGE9 314 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 GOLGA5Q8TBA6 731 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 MRGPRDQ8TDS7 321 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 LIPHQ8WWY8 451 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 KRT12Q99456 494 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 LITAFQ99732 161 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 PINK1Q9BXM7 581 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 ECT2Q9H8V3 914 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 POLE3Q9NRF9 147 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 PLCXD1Q9NUJ7 323 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 KLK11Q9UBX7 282 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 LNPEPQ9UIQ6 1025 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 BLOC1S6Q9UL45 172 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 LRP12Q9Y561 859 aa4.05□□□□□ -1.76
LINC00400-201ENST00000425609 TNS2Q63HR2 1409 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 AKAP12Q02952 1782 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 NUP188Q5SRE5 1749 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 PEAK1Q9H792 1746 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 MAP3K5Q99683 1374 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 PIK3C2AO00443 1686 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 YJEFN3A6XGL0 299 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 PRSS44E7EML9 344 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 K7EQD1 137 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CSO75390 466 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 IFNB1P01574 187 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 LYNP07948 512 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 GNSP15586 552 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CALRP27797 417 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 PKLRP30613 574 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 TSFMP43897 325 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 SLC6A8P48029 635 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 HSD17B7P56937 341 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 SNRPD1P62314 119 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 GABPB1Q06547 395 aaPredicted RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 HNRNPA0Q13151 305 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CARTPTQ16568 116 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 SGSM1Q2NKQ1 1148 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 HLA-BQ31612 363 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 AGKQ53H12 422 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CES4AQ5XG92 561 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 RUSC1-AS1Q66K80 236 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 NEPROQ6NW34 567 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 FRRS1Q6ZNA5 592 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CHMP1BQ7LBR1 199 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 LRRC17Q8N6Y2 441 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 COLGALT1Q8NBJ5 622 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 U2AF1L4Q8WU68 220 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 MRPL24Q96A35 216 aaKnown RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 TMEM45BQ96B21 275 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 CNRIP1Q96F85 164 aaPredicted RBP4.04□□□□□ -1.76
LINC00400-201ENST00000425609 NMNAT2Q9BZQ4 307 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 TMEM231Q9H6L2 316 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 ZNF696Q9H7X3 374 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 HPS4Q9NQG7 708 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 GDF3Q9NR23 364 aa4.04□□□□□ -1.76
LINC00400-201ENST00000425609 ERRFI1Q9UJM3 462 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms