RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
SDCBP-203ENST00000424270 C2orf92A0A1B0GVN3 265 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 E7EVH7 732 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 EIF3FO00303 357 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ABCD4O14678 606 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PSMD3O43242 534 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CBR3O75828 277 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 SNUPNO95149 360 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 BCL10O95999 233 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CGAP01215 116 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 THBS1P07996 1170 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HIST1H2AGP0C0S8 130 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 FCGR2AP12318 317 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF708P17019 499 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HIST1H2ADP20671 130 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 TTKP33981 857 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CASP3P42574 277 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 LHX2P50458 406 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CHN2P52757 468 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PLA2G16P53816 162 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CLDN18P56856 261 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 EIF3EP60228 445 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 RPS3AP61247 264 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PHC1P78364 1004 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PLIN5Q00G26 463 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF844Q08AG5 666 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 FUT7Q11130 342 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CDH17Q12864 832 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 GBX1Q14549 363 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 TSC22D1Q15714 1073 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CTSL3PQ5NE16 218 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 DEPDC1Q5TB30 811 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 E4F1Q66K89 784 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 AGTRAPQ6RW13 159 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 LCTLQ6UWM7 567 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 RBMS3Q6XE24 437 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF534Q76KX8 674 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ATG4DQ86TL0 474 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 GLCCI1Q86VQ1 547 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PRR22Q8IZ63 422 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 BPIFB2Q8N4F0 458 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PRELID2Q8N945 189 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 OR52K1Q8NGK4 314 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 OR6K3Q8NGY3 331 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HSD17B8Q92506 261 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 GFM2Q969S9 779 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 PPWD1Q96BP3 646 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 NXNL1Q96CM4 212 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 TSNARE1Q96NA8 513 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 FOXN4Q96NZ1 517 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CSF3RQ99062 836 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 FAM118BQ9BPY3 351 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 AIF1LQ9BQI0 150 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 H2AFJQ9BTM1 129 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 OSBPL11Q9BXB4 747 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 NPLQ9BXD5 320 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 GRIP2Q9C0E4 1043 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 WWTR1Q9GZV5 400 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 CCDC68Q9H2F9 335 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 SNX15Q9NRS6 342 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 FETUBQ9UGM5 382 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 ING1Q9UK53 422 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 DYRK1BQ9Y463 629 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 HYOU1Q9Y4L1 999 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 MAD1L1Q9Y6D9 718 aa5.65□□□□□ -1.5
SDCBP-203ENST00000424270 BZW2Q9Y6E2 419 aaKnown RBP5.65□□□□□ -1.5
SDCBP-203ENST00000424270 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.65□□□□□ -1.54e-6■□□□□ 10.9
SDCBP-203ENST00000424270 A0A087X0T9 212 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 NPIPA5A0A0B4J1W7 369 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 LOC390937A0A1W2PQ73 354 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 NPIPA7E9PJI5 369 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 H7C417 338 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 M0QZ24 198 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 HCRTR2O43614 444 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ESR1P03372 595 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 FAM228BP0C875 321 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 NPIPA8P0DM63 369 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 PEPDP12955 493 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ENO3P13929 434 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 EPHA1P21709 976 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 RPS3P23396 243 aaKnown RBP eCLIP5.64□□□□□ -1.511e-6■■■□□ 16.9
SDCBP-203ENST00000424270 ADRA1DP25100 572 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CERS1P27544 350 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ADH6P28332 368 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 AHRP35869 848 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 SCTRP47872 440 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 SMCPP49901 116 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 LIM2P55344 173 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 HERVK_113P63132 956 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ERVK-8P63133 956 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 TGM3Q08188 693 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 CCNIQ14094 377 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF267Q14586 743 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-203ENST00000424270 TAB1Q15750 504 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 PARP6Q2NL67 630 aa5.64□□□□□ -1.51
SDCBP-203ENST00000424270 VAX1Q5SQQ9 334 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms