RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 CLPXO76031 633 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 MFN2O95140 757 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 MYF5P13349 255 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 RYKP34925 604 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 CSTF1Q05048 431 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 RNF165Q6ZSG1 346 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PARGQ86W56 976 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 AMIGO1Q86WK6 493 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 DTX3Q8N9I9 347 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 RAB2BQ8WUD1 216 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 GEMIN6Q8WXD5 167 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ZHX1-C8orf76Q96EF9 292 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 MRGPRX1Q96LB2 322 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 SPATA7Q9P0W8 599 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 NFKBIL1Q9UBC1 381 aaPredicted RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ENPP5Q9UJA9 477 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 CLCA2Q9UQC9 943 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 RWDD3Q9Y3V2 267 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ENPP4Q9Y6X5 453 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 HIST1H1TP22492 207 aaPredicted RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 XCR1P46094 333 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 FOXL2P58012 376 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 EXOSC7Q15024 291 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 TSTQ16762 297 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 MLIPQ5VWP3 458 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PODNL1Q6PEZ8 512 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 FIGNL1Q6PIW4 674 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 SMARCD3Q6STE5 483 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 UBE2J2Q8N2K1 259 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 SETD7Q8WTS6 366 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PIK3R3Q92569 461 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 HTRA1Q92743 480 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 BMFQ96LC9 184 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PLA2G12AQ9BZM1 189 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ZC3H12DA2A288 527 aaKnown RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 AIREO43918 545 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ITGAMP11215 1152 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TRIM23P36406 574 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 GPR4P46093 362 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 FUT5Q11128 374 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 INAQ16352 499 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ARMCX4Q5H9R4 360 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 DCST1Q5T197 706 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TRIM48Q8IWZ4 208 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ZBED6CLQ96FA7 236 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 DUSP21Q9H596 190 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 IL21RQ9HBE5 538 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TOR4AQ9NXH8 423 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TMCC3Q9ULS5 477 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 PADI2Q9Y2J8 665 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 EPPINO95925 133 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ATP5A1P25705 553 aaKnown RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 REEP5Q00765 189 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 GPR18Q14330 331 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 CENPSQ8N2Z9 138 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 OR13H1Q8NG92 308 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF675Q8TD23 568 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 STARD8Q92502 1023 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 HRASLS5Q96KN8 279 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 POLR2J3Q9H1A7 115 aaKnown RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 PRDM7Q9NQW5 492 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 HCN4Q9Y3Q4 1203 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 NCOR1O75376 2440 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 SDC3O75056 442 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 AZGP1P25311 298 aaKnown RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 GGT2P36268 569 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 LSSP48449 732 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 INSL4Q14641 139 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF630Q2M218 657 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-204ENST00000423636 RFX4Q33E94 735 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ABHD17CQ6PCB6 329 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 MTSS1LQ765P7 747 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF765Q7L2R6 523 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 CHCHD4Q8N4Q1 142 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TMEM52Q8NDY8 209 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 OR4C15Q8NGM1 316 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 TBX5Q99593 518 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 FNDC11Q9BVV2 318 aa11.24□□□□□ -0.61
PTPRN-204ENST00000423636 RP1P56715 2156 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PIP5K1CO60331 668 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 RPN2P04844 631 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 BMP4P12644 408 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CD79BP40259 229 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 TMBIM6P55061 237 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CAV3P56539 151 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 Q6ZSR6 202 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms