RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 ACACAQ13085 2346 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 A0A1B0GW55 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 A6NL46 340 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 PRMT3O60678 531 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 SEC14L2O76054 403 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 EGFP01133 1207 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 CD9P21926 228 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 ARPC4P59998 168 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 NKX3-2P78367 333 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 ZNF77Q15935 545 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 SMU1Q2TAY7 513 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 GTF2IRD2BQ6EKJ0 949 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 GTF2IRD2Q86UP8 949 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 RHOXF1Q8NHV9 184 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 GRPEL2Q8TAA5 225 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DTD2Q96FN9 168 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 RACGAP1Q9H0H5 632 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 TP63Q9H3D4 680 aaPredicted RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 NLKQ9UBE8 527 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 IFT52Q9Y366 437 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 PCDH17O14917 1159 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 ALPPP05187 535 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DCNP07585 359 aaKnown RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 C1GALT1C1LP0DN25 315 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 PSMB5P28074 263 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 HOXC13P31276 330 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 ACSL1P33121 698 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 PPP2R2BQ00005 443 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 LGALS3BPQ08380 585 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 FCHO2Q0JRZ9 810 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 TOR1AIP1Q5JTV8 583 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 TEX26Q8N6G2 289 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 RETREG1Q9H6L5 497 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 EIF3KQ9UBQ5 218 aaKnown RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 AGAP5A6NIR3 686 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 IL1RNP18510 177 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 DRD1P21728 446 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 SELENOWP63302 87 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 ZNF155Q12901 538 aaPredicted RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 PTGES3Q15185 160 aaKnown RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 FRRS1Q6ZNA5 592 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 C6orf120Q7Z4R8 191 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 FAM83FQ8NEG4 500 aaPredicted RBP14.34□□□□□ -0.11
SHISA9-201ENST00000423335 GPR151Q8TDV0 419 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 GRHL3Q8TE85 626 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 FOXQ1Q9C009 403 aa14.34□□□□□ -0.11
SHISA9-201ENST00000423335 IRGMA1A4Y4 181 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 RIIAD1A6NNX1 92 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 ANHXE9PGG2 379 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 MAN2B1O00754 1011 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 MRPL3P09001 348 aaKnown RBP14.33□□□□□ -0.11
SHISA9-201ENST00000423335 PCSK2P16519 638 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 EPHA2P29317 976 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 EIF2B5Q13144 721 aaKnown RBP14.33□□□□□ -0.11
SHISA9-201ENST00000423335 DEFB133Q30KQ1 61 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 LILRA6Q6PI73 481 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 BTLAQ7Z6A9 289 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 COMMD2Q86X83 199 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 PEX5LQ8IYB4 626 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 OR4C6Q8NH72 309 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 NEIL2Q969S2 332 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 RGMAQ96B86 450 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 DNAJA3Q96EY1 480 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 TMEM19Q96HH6 336 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.11
SHISA9-201ENST00000423335 NTMT1Q9BV86 223 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 KCNN2Q9H2S1 579 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 RNF167Q9H6Y7 350 aa14.33□□□□□ -0.11
SHISA9-201ENST00000423335 C8orf33Q9H7E9 229 aaPredicted RBP14.33□□□□□ -0.11
SHISA9-201ENST00000423335 NMNAT1Q9HAN9 279 aaPredicted RBP14.33□□□□□ -0.11
SHISA9-201ENST00000423335 A0A1W2PQL4 384 aaPredicted RBP14.33□□□□□ -0.12
SHISA9-201ENST00000423335 ANKRD33BA6NCL7 494 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 FAM227AF5H4B4 570 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 J3QLW9 94 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 DLGAP1O14490 977 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 CLDN4O14493 209 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 AQP9O43315 295 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 FRS3O43559 492 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 AKAP8O43823 692 aaKnown RBP14.33□□□□□ -0.12
SHISA9-201ENST00000423335 TOXO94900 526 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 ZNF19P17023 458 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 ZNF367Q7RTV3 350 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 SFTPA1Q8IWL2 248 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 Q8N402 240 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 NEIL3Q8TAT5 605 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
SHISA9-201ENST00000423335 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
SHISA9-201ENST00000423335 A0A1B0GVC2 190 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 A6NIN4 97 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 M0R3H8 397 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 PVRP15151 417 aa14.33□□□□□ -0.12
SHISA9-201ENST00000423335 RPS3P23396 243 aaKnown RBP eCLIP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms