RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TM4SF18Q96CE8 201 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 DOHHQ9BU89 302 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 FAIM2Q9BWQ8 316 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 ZDHHC11Q9H8X9 412 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 KCNJ16Q9NPI9 418 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 TRPS1Q9UHF7 1281 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 DCDC2Q9UHG0 476 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 ZNF225Q9UK10 706 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 CES1P1Q9UKY3 287 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 BOKQ9UMX3 212 aaPredicted RBP8.55□□□□□ -1.04
NUP50-206ENST00000422489 NPFFR2Q9Y5X5 522 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 ZNF780BQ9Y6R6 833 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 CPAMD8Q8IZJ3 1885 aa8.55□□□□□ -1.04
NUP50-206ENST00000422489 TEX15Q9BXT5 2789 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 A0A1W2PPM1 405 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 FOXO6A8MYZ6 492 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 HCN1O60741 890 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 IGHG3P01860 377 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CHN1P15882 459 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CSNK2A2P19784 350 aaPredicted RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 ACVR2AP27037 513 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 GDF1P27539 372 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CHRNB4P30926 498 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 MASP1P48740 699 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 RPP38P78345 283 aaKnown RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 GALNT1Q10472 559 aaPredicted RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 FUT7Q11130 342 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 TBL3Q12788 808 aaKnown RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 MAP4K2Q12851 820 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 EXOSC7Q15024 291 aaKnown RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 RASA2Q15283 850 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 NNATQ16517 81 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 HYAL4Q2M3T9 481 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 SPDYAQ5MJ70 313 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 B3GNT6Q6ZMB0 384 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 GSPT2Q8IYD1 628 aaKnown RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 CCDC116Q8IYX3 515 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 ZNF615Q8N8J6 731 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 OR7G1Q8NGA0 311 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 LILRB4Q8NHJ6 448 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CHTF18Q8WVB6 975 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 SARAFQ96BY9 339 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 KLHL29Q96CT2 875 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 TMEM237Q96Q45 408 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 C1QTNF3Q9BXJ4 246 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 SLC6A15Q9H2J7 730 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 BRF2Q9HAW0 419 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 PROK2Q9HC23 129 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 SH2D2AQ9NP31 389 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 PSMC3IPQ9P2W1 217 aaPredicted RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 B4GALT7Q9UBV7 327 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CNOT11Q9UKZ1 510 aaKnown RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 TIMM22Q9Y584 194 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 CHCHD2Q9Y6H1 151 aaPredicted RBP8.54□□□□□ -1.04
NUP50-206ENST00000422489 CNTRLQ7Z7A1 2325 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 SCN2AQ99250 2005 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 POLEQ07864 2286 aa8.54□□□□□ -1.04
NUP50-206ENST00000422489 A0A1B0GVC2 190 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 CCDC151A5D8V7 595 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 OR14I1A6ND48 311 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SMIM23A6NLE4 172 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 FIGNL2A6NMB9 653 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 AQP7O14520 342 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 GNB5O14775 395 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SUSD5O60279 629 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 CRCPO75575 148 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 GSTA1P08263 222 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 IL3P08700 152 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 GLI4P10075 376 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 MYL2P10916 166 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SLCO1A2P46721 670 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 HTR6P50406 440 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 PRKAA2P54646 552 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 TRA2BP62995 288 aaKnown RBP8.53□□□□□ -1.04
NUP50-206ENST00000422489 HMGCS1Q01581 520 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
NUP50-206ENST00000422489 LTB4RQ15722 352 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 NTRK2Q16620 822 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 PRICKLE4Q2TBC4 344 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 TRMT12Q53H54 448 aaKnown RBP8.53□□□□□ -1.04
NUP50-206ENST00000422489 C1orf185Q5T7R7 199 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 BICRALQ6AI39 1079 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 LCA5Q86VQ0 697 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SLC22A9Q8IVM8 553 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 GBP7Q8N8V2 638 aaPredicted RBP8.53□□□□□ -1.04
NUP50-206ENST00000422489 ZNF441Q8N8Z8 693 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 LRRN4CLQ8ND94 238 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 OR52R1Q8NGF1 315 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 CDC26Q8NHZ8 85 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 SPPL2AQ8TCT8 520 aa8.53□□□□□ -1.04
NUP50-206ENST00000422489 ACMSDQ8TDX5 336 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms