RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 UCK2Q9BZX2 261 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 RANBP3Q9H6Z4 567 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 PPP1R3EQ9H7J1 279 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 NMNAT1Q9HAN9 279 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 FGF20Q9NP95 211 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 EMC7Q9NPA0 242 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 PLSCR3Q9NRY6 295 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 ZNF275Q9NSD4 429 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 TMEM184CQ9NVA4 438 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 NFKBIL1Q9UBC1 381 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 TNFRSF10DQ9UBN6 386 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 EIF3KQ9UBQ5 218 aaKnown RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 PLEKHB1Q9UF11 243 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 ACAD8Q9UKU7 415 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 ELF5Q9UKW6 265 aaPredicted RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 TMCC3Q9ULS5 477 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 EXOSC1Q9Y3B2 195 aaKnown RBP6.65□□□□□ -1.34
TVP23C-202ENST00000419890 PPIL1Q9Y3C6 166 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 PRSS21Q9Y6M0 314 aa6.65□□□□□ -1.34
TVP23C-202ENST00000419890 BRWD1Q9NSI6 2320 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 TRDV1A0A1B0GX56 115 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 A0A1W2PQ72 361 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 A0A1W2PQL4 384 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 PIPSLA2A3N6 862 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 C7orf66A4D0T2 115 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MTMR11A4FU01 709 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MGAT4DA6NG13 374 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 C12orf71A8MTZ7 269 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 H7C4K7 107 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 LINC01387J3KSC0 135 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 FOXE1O00358 373 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 LYRM1O43325 122 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CHST10O43529 356 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 RFPL3O75679 317 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 FGF18O76093 207 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CPSF4O95639 269 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 WNT11O96014 354 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 HBQ1P09105 142 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SLC2A2P11168 524 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 LAMP1P11279 417 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 UBL4AP11441 157 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ARSBP15848 533 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ITGB6P18564 788 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 LAG3P18627 525 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 GSTM5P46439 218 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ATP12AP54707 1039 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 RAG2P55895 527 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 WNT4P56705 351 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SRP54P61011 504 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 RHOAP61586 193 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CDK6Q00534 326 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 BDH1Q02338 343 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 IRF8Q02556 426 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 TWF1Q12792 350 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 RAB40BQ12829 278 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ELAVL2Q12926 359 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 HNRNPA0Q13151 305 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 GPR17Q13304 367 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 HEPACAMQ14CZ8 416 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 COL28A1Q2UY09 1125 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 PYDC2Q56P42 97 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ZMAT1Q5H9K5 638 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 FAM151BQ6UXP7 276 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CASP12Q6UXS9 341 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 Q6ZPB1 254 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 GET4Q7L5D6 327 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MRGPREQ86SM8 312 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 CLECL1Q8IZS7 167 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 OR9Q2Q8NGE9 314 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SPPL3Q8TCT6 385 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 POF1BQ8WVV4 589 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 UFD1Q92890 307 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 HGDQ93099 445 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SH3KBP1Q96B97 665 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 EID2BQ96D98 161 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 WDR34Q96EX3 536 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MYEOVQ96EZ4 313 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ZNF558Q96NG5 402 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 COPS8Q99627 209 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 SEPT5Q99719 369 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 DPH2Q9BQC3 489 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 TMEM43Q9BTV4 400 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 BOCQ9BWV1 1114 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 TSSK6Q9BXA6 273 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 ZNF717Q9BY31 904 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MRPL9Q9BYD2 267 aaKnown RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 LMAN2LQ9H0V9 348 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 MMP28Q9H239 520 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 REEP4Q9H6H4 257 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 TRIM45Q9H8W5 580 aaPredicted RBP6.64□□□□□ -1.35
TVP23C-202ENST00000419890 BPIFA1Q9NP55 256 aa6.64□□□□□ -1.35
TVP23C-202ENST00000419890 AMBNQ9NP70 447 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms