RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TRNT1Q96Q11 434 aaKnown RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 PIP5K1AQ99755 562 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 TUBA8Q9NY65 449 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 NDUFA13Q9P0J0 144 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SEC14L3Q9UDX4 400 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SH3GLB1Q9Y371 365 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 LYVE1Q9Y5Y7 322 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 RNF215Q9Y6U7 377 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF860A6NHJ4 632 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 TNFRSF11BO00300 401 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 UGT2B11O75310 529 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 SOX30O94993 753 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 NSA2O95478 260 aaKnown RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ALPPL2P10696 532 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 GABRA4P48169 554 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 FNTBP49356 437 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PPP1R8Q12972 351 aaKnown RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 KCNAB2Q13303 367 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 APOFQ13790 326 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 SYPL1Q16563 259 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ZIK1Q3SY52 487 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 RPS26P11Q5JNZ5 115 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PMS2CLQ68D20 193 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 FAHD1Q6P587 224 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ZCCHC12Q6PEW1 402 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PLXDC1Q8IUK5 500 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 C8orf59Q8N0T1 100 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 TSPAN14Q8NG11 270 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF675Q8TD23 568 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 GIMAP5Q96F15 307 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 TGM7Q96PF1 710 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 OR7D2Q96RA2 312 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 MBOAT4Q96T53 435 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 CLCA2Q9UQC9 943 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 MRPS33Q9Y291 106 aaKnown RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 THADAQ6YHU6 1953 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 LOC100130705A0A1B0GUX0 176 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 A0A1W2PS29 197 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PRAMEF27A3QJZ7 478 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 FITM1A5D6W6 292 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 TRIM64A6NGJ6 449 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 CASC3O15234 703 aaKnown RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 HCRTR1O43613 425 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 DUX1O43812 170 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PLOD3O60568 738 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 TDGF1P13385 188 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 RNH1P13489 461 aaKnown RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ANXA8P13928 327 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 OR1E2P47887 323 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PPM1FP49593 454 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 DAPP51397 102 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 OLR1P78380 273 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 SHC2P98077 582 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 DEFB110Q30KQ9 67 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 CDC73Q6P1J9 531 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 THAP5Q7Z6K1 395 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF605Q86T29 641 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 SLC25A45Q8N413 288 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 OR7G2Q8NG99 324 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 OR6C4Q8NGE1 309 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 ADAMTS15Q8TE58 950 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 GIPC3Q8TF64 312 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 NCSTNQ92542 709 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 KAT2AQ92830 837 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 COL26A1Q96A83 441 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 MUS81Q96NY9 551 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 PSD2Q9BQI7 771 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 DUSP23Q9BVJ7 150 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 AMBRA1Q9C0C7 1298 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 GIN1Q9NXP7 522 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 KIF17Q9P2E2 1029 aa15.76■□□□□ 0.11
SSBP3-205ENST00000417664 C19orf53Q9UNZ5 99 aaPredicted RBP15.76■□□□□ 0.11
SSBP3-205ENST00000417664 IGHV1OR21-1A0A087WYE8 117 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 ARRDC5A6NEK1 342 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 PRAMEF25A6NGN4 478 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 SGK494L7N484 410 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 LAMTOR5O43504 91 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 DNAJB6O75190 326 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 ALDH4A1P30038 563 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 DHPSP49366 369 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-205ENST00000417664 NR1H2P55055 460 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 SPIBQ01892 262 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 LTB4RQ15722 352 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF628Q5EBL2 1059 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 MFSD12Q6NUT3 480 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 CYP4Z1Q86W10 505 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF786Q8N393 782 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 ATG16L2Q8NAA4 619 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 OR4C15Q8NGM1 316 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 OR9A4Q8NGU2 314 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 GAB3Q8WWW8 586 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 TRIM45Q9H8W5 580 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-205ENST00000417664 STARD5Q9NSY2 213 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 SEMA5BQ9P283 1151 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 KCND3Q9UK17 655 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 HSPE1-MOB4S4R3N1 261 aa15.75■□□□□ 0.11
SSBP3-205ENST00000417664 TP53BP1Q12888 1972 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms